RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeast

Gene SCM3, Length 672 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCM3	YDL139C	RSR1	P13856	272 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	ERD1	P16151	362 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	NCP1	P16603	691 aa	Known RBP	4.67	□□□□□ -1.66
SCM3	YDL139C	RPS1B	P23248	255 aa	Known RBP	4.67	□□□□□ -1.66
SCM3	YDL139C	DPB2	P24482	689 aa	Predicted RBP	4.67	□□□□□ -1.66
SCM3	YDL139C	GRR1	P24814	1151 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	PRE2	P30656	287 aa	Known RBP	4.67	□□□□□ -1.66
SCM3	YDL139C	NDC1	P32500	655 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	CDC13	P32797	924 aa	Known RBP	4.67	□□□□□ -1.66
SCM3	YDL139C	HCS1	P34243	683 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	SCO2	P38072	301 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	MUM2	P38236	366 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	PEX18	P38855	283 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	RIX1	P38883	763 aa	Predicted RBP	4.67	□□□□□ -1.66
SCM3	YDL139C	IPT1	P38954	527 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	YAL037W	P39728	267 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	GDI1	P39958	451 aa	Known RBP	4.67	□□□□□ -1.66
SCM3	YDL139C	PMT6	P42934	759 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	YFR018C	P43599	363 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	YFR054C	P43622	192 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	EFM3	P47163	339 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	YIP4	P53093	235 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	DSL1	P53847	754 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	RHO3	Q00245	231 aa	Known RBP	4.67	□□□□□ -1.66
SCM3	YDL139C	RSC9	Q03124	581 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	MAK3	Q03503	176 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	TRS23	Q03784	219 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	YOR389W	Q08912	624 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	MRX4	Q12467	430 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	YOR019W	Q99248	730 aa		4.67	□□□□□ -1.66
SCM3	YDL139C	IRA2	P19158	3079 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	FAS1	P07149	2051 aa	Known RBP	4.66	□□□□□ -1.66
SCM3	YDL139C	GPH1	P06738	902 aa	Known RBP	4.66	□□□□□ -1.66
SCM3	YDL139C	CAR2	P07991	424 aa	Known RBP	4.66	□□□□□ -1.66
SCM3	YDL139C	BAR1	P12630	587 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	KSS1	P14681	368 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	TAH1	P25638	111 aa	Predicted RBP	4.66	□□□□□ -1.66
SCM3	YDL139C	BUB3	P26449	341 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	LHS1	P36016	881 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	NTR2	P36118	322 aa	Predicted RBP	4.66	□□□□□ -1.66
SCM3	YDL139C	ASC1	P38011	319 aa	Known RBP	4.66	□□□□□ -1.66
SCM3	YDL139C	MIT1	P40002	666 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	RRG9	P40156	214 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	POP1	P41812	875 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	CWC23	P52868	283 aa	Predicted RBP	4.66	□□□□□ -1.66
SCM3	YDL139C	YPL071C	Q02864	156 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	YML122C	Q03207	126 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	FMP42	Q04991	504 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	BOP2	Q06150	570 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	DBP9	Q06218	594 aa	Known RBP	4.66	□□□□□ -1.66
SCM3	YDL139C	CYK3	Q07533	885 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	CRT10	Q08226	957 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	VIK1	Q12045	647 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	RRP12	Q12754	1228 aa	Known RBP	4.66	□□□□□ -1.66
SCM3	YDL139C	RIB3	Q99258	208 aa		4.66	□□□□□ -1.66
SCM3	YDL139C	IRA1	P18963	3092 aa		4.65	□□□□□ -1.66
SCM3	YDL139C	ZWF1	P11412	505 aa	Known RBP	4.65	□□□□□ -1.67
SCM3	YDL139C	HOM2	P13663	365 aa	Known RBP	4.65	□□□□□ -1.67
SCM3	YDL139C	CNE1	P27825	502 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	ACH1	P32316	526 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	PRP21	P32524	280 aa	Predicted RBP	4.65	□□□□□ -1.67
SCM3	YDL139C	SEC66	P33754	206 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	UTP11	P34247	250 aa	Predicted RBP	4.65	□□□□□ -1.67
SCM3	YDL139C	RPS27A	P35997	82 aa	Known RBP	4.65	□□□□□ -1.67
SCM3	YDL139C	VPS21	P36017	210 aa	Known RBP	4.65	□□□□□ -1.67
SCM3	YDL139C	RPS27B	P38711	82 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	MTG2	P38860	518 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	VPS52	P39904	641 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	AIM10	P39965	576 aa	Known RBP	4.65	□□□□□ -1.67
SCM3	YDL139C	YEL068C	P39977	110 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	THO1	P40040	218 aa	Known RBP	4.65	□□□□□ -1.67
SCM3	YDL139C	NAS2	P40555	220 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	MSS2	P40990	351 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	IDS2	P46958	469 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	JHD2	P47156	728 aa	Predicted RBP	4.65	□□□□□ -1.67
SCM3	YDL139C	SDT1	P53078	280 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	TWF1	P53250	332 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	BUD17	P53727	317 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	SWP1	Q02795	286 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	YPL107W	Q02873	248 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	RRN5	Q02983	363 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	YMD8	Q03697	442 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	ELP6	Q04868	273 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	NDL1	Q06568	189 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	SPC3	Q12133	184 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	SIA1	Q12212	622 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	GLE1	Q12315	538 aa		4.65	□□□□□ -1.67
SCM3	YDL139C	YBR056W-A	I2HB52	66 aa		4.64	□□□□□ -1.67
SCM3	YDL139C	COX3	P00420	269 aa		4.64	□□□□□ -1.67
SCM3	YDL139C	TAL1	P15019	335 aa	Known RBP	4.64	□□□□□ -1.67
SCM3	YDL139C	CLB3	P24870	427 aa		4.64	□□□□□ -1.67
SCM3	YDL139C	MGR1	P25573	417 aa		4.64	□□□□□ -1.67
SCM3	YDL139C	VPH2	P32341	215 aa		4.64	□□□□□ -1.67
SCM3	YDL139C	ZRT3	P34240	503 aa		4.64	□□□□□ -1.67
SCM3	YDL139C	YKR015C	P36111	568 aa		4.64	□□□□□ -1.67
SCM3	YDL139C	SBE22	P38814	852 aa		4.64	□□□□□ -1.67
SCM3	YDL139C	ELO1	P39540	310 aa		4.64	□□□□□ -1.67
SCM3	YDL139C	SPG5	P42933	373 aa		4.64	□□□□□ -1.67
SCM3	YDL139C	FAR7	P43592	221 aa		4.64	□□□□□ -1.67
SCM3	YDL139C	IRC6	P43615	237 aa		4.64	□□□□□ -1.67

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