RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 NT5C3AQ9H0P0 336 aa12.15□□□□□ -0.46
SCARB2-222ENST00000640634 ADAMTS10Q9H324 1103 aa12.15□□□□□ -0.46
SCARB2-222ENST00000640634 AGO3Q9H9G7 860 aaKnown RBP12.15□□□□□ -0.46
SCARB2-222ENST00000640634 A0A087WZ62 844 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 SFI1A8K8P3 1242 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 POLR2DO15514 142 aaKnown RBP12.14□□□□□ -0.47
SCARB2-222ENST00000640634 DGAT1O75907 488 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 XRCC6P12956 609 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCARB2-222ENST00000640634 GLRA2P23416 452 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 CASP1P29466 404 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 STAT6P42226 847 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 GPC3P51654 580 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 NDUFA8P51970 172 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 LAMTOR4Q0VGL1 99 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 MAPK7Q13164 816 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 CAPSQ13938 189 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 FAM26DQ5JW98 314 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 RRAGBQ5VZM2 374 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 CHRDL2Q6WN34 429 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 C1orf186Q6ZWK4 172 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 RPAINQ86UA6 219 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 GPBP1Q86WP2 473 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 GRAMD1CQ8IYS0 662 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 CCDC155Q8N6L0 562 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 SYT2Q8N9I0 419 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-222ENST00000640634 LARP4BQ92615 738 aaKnown RBP12.14□□□□□ -0.47
SCARB2-222ENST00000640634 MAP7D2Q96T17 732 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 GDF15Q99988 308 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 FDXACB1Q9BRP7 624 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-222ENST00000640634 CELF4Q9BZC1 486 aaKnown RBP12.14□□□□□ -0.47
SCARB2-222ENST00000640634 MINDY3Q9H8M7 445 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 TRPV2Q9Y5S1 764 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 SRGAP2CP0DJJ0 459 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 CYP11B2P19099 503 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 CD52P31358 61 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 ARL2P36404 184 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 TXLNAP40222 546 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 FBXO47Q5MNV8 452 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 ADALQ6DHV7 355 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 EXOC8Q8IYI6 725 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 FSIP1Q8NA03 581 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 NLRP7Q8WX94 980 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 DDX27Q96GQ7 796 aaKnown RBP12.14□□□□□ -0.47
SCARB2-222ENST00000640634 LBHD1Q9BQE6 289 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-222ENST00000640634 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCARB2-222ENST00000640634 REEP2Q9BRK0 252 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 CCDC39Q9UFE4 941 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 USP20Q9Y2K6 914 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 NOC2LQ9Y3T9 749 aaKnown RBP12.14□□□□□ -0.47
SCARB2-222ENST00000640634 COL4A3BPQ9Y5P4 624 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 CDH23Q9H251 3354 aa12.14□□□□□ -0.47
SCARB2-222ENST00000640634 SZT2Q5T011 3432 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 ADGRA3Q8IWK6 1321 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 HIP1RO75146 1068 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 RFX1P22670 979 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 TMOD1P28289 359 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 OTOP2Q7RTS6 562 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 DYMQ7RTS9 669 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 TMCO2Q7Z6W1 182 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-222ENST00000640634 RSPH3Q86UC2 560 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 TMEM199Q8N511 208 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 DBF4BQ8NFT6 615 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 PSPC1Q8WXF1 523 aaKnown RBP12.13□□□□□ -0.47
SCARB2-222ENST00000640634 SCLT1Q96NL6 688 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 IFT122Q9HBG6 1241 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 CXXC1Q9P0U4 656 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-222ENST00000640634 KCNH3Q9ULD8 1083 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 HPSEQ9Y251 543 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 CHD9Q3L8U1 2897 aa12.13□□□□□ -0.47
SCARB2-222ENST00000640634 MYMKA6NI61 221 aa12.12□□□□□ -0.47
SCARB2-222ENST00000640634 CAND2O75155 1236 aa12.12□□□□□ -0.47
SCARB2-222ENST00000640634 EDN1P05305 212 aa12.12□□□□□ -0.47
SCARB2-222ENST00000640634 ZNF16P17020 682 aaPredicted RBP12.12□□□□□ -0.47
SCARB2-222ENST00000640634 CMA1P23946 247 aa12.12□□□□□ -0.47
SCARB2-222ENST00000640634 LONRF3Q496Y0 759 aa12.12□□□□□ -0.47
SCARB2-222ENST00000640634 IER5Q5VY09 327 aa12.12□□□□□ -0.47
SCARB2-222ENST00000640634 ZNF365Q70YC5 407 aa12.12□□□□□ -0.47
SCARB2-222ENST00000640634 FAM228AQ86W67 206 aa12.12□□□□□ -0.47
SCARB2-222ENST00000640634 RNF149Q8NC42 400 aa12.12□□□□□ -0.47
SCARB2-222ENST00000640634 IL23AQ9NPF7 189 aa12.12□□□□□ -0.47
SCARB2-222ENST00000640634 SERTAD1Q9UHV2 236 aa12.12□□□□□ -0.47
SCARB2-222ENST00000640634 ACTN4O43707 911 aaKnown RBP12.11□□□□□ -0.47
SCARB2-222ENST00000640634 CXCL10P02778 98 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 LIG1P18858 919 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 DNM2P50570 870 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 SHHQ15465 462 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 TMEM240Q5SV17 173 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 CCDC73Q6ZRK6 1079 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 NME8Q8N427 588 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 MCPH1Q8NEM0 835 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 LINC01599Q8WXQ3 324 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 MRPS27Q92552 414 aaKnown RBP12.11□□□□□ -0.47
SCARB2-222ENST00000640634 IFIH1Q9BYX4 1025 aaKnown RBP12.11□□□□□ -0.47
SCARB2-222ENST00000640634 UBE2OQ9C0C9 1292 aaKnown RBP12.11□□□□□ -0.47
SCARB2-222ENST00000640634 BLZF1Q9H2G9 400 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 PRO3102Q9H379 93 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 TMX1Q9H3N1 280 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 FAM13BQ9NYF5 915 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 STK17AQ9UEE5 414 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 PADI3Q9ULW8 664 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms