RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 R3HDM1Q15032 1099 aaKnown RBP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 HSP90AA5PQ58FG0 334 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 ERMARDQ5T6L9 678 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 CAPN12Q6ZSI9 719 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 TRIM67Q6ZTA4 783 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 AGGF1Q8N302 714 aaeCLIP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 SMYD1Q8NB12 490 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 DDX18Q9NVP1 670 aaKnown RBP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 CIDEBQ9UHD4 219 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 TMEM98Q9Y2Y6 226 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 KCNK3O14649 394 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 PYGMP11217 842 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 EEF2P13639 858 aaKnown RBP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 PDE1BQ01064 536 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 RNASELQ05823 741 aaKnown RBP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 TBL3Q12788 808 aaKnown RBP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 SCYL3Q8IZE3 742 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 SCG3Q8WXD2 468 aaKnown RBP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 PTPRN2Q92932 1015 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 EEF2KMTQ96G04 330 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 NEUROD6Q96NK8 337 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 SLC4A9Q96Q91 983 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 EIF2AQ9BY44 585 aaKnown RBP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 TANGO6Q9C0B7 1094 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 DCLRE1BQ9H816 532 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 NKX1-2Q9UD57 310 aaPredicted RBP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 PNMA3Q9UL41 463 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 ITIH6Q6UXX5 1313 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 F8W031 263 aaPredicted RBP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 FTCDO95954 541 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 RARAP10276 462 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 CASP1P29466 404 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 ITGA7Q13683 1181 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 MICU3Q86XE3 530 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 PHTF2Q8N3S3 785 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 STAG2Q8N3U4 1231 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 SP7Q8TDD2 431 aaPredicted RBP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 METTL22Q9BUU2 404 aaPredicted RBP7.66□□□□□ -1.18
NECAP1-213ENST00000638883 STK32BQ9NY57 414 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 NKIRAS1Q9NYS0 192 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 AFF2P51816 1311 aa7.66□□□□□ -1.18
NECAP1-213ENST00000638883 TMEM247A6NEH6 219 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 NBPF26B4DH59 902 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 F8VZ95 297 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 ATP5HO75947 161 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 TJP3O95049 919 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 BAG3O95817 575 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 ITGA2BP08514 1039 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 RXRAP19793 462 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 HOXD12P35452 270 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 HSPA9P38646 679 aaKnown RBP7.65□□□□□ -1.18
NECAP1-213ENST00000638883 TIMM10P62072 90 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 BYSLQ13895 437 aaKnown RBP7.65□□□□□ -1.18
NECAP1-213ENST00000638883 PTPROQ16827 1216 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 KCTD21Q4G0X4 260 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 TNNI3KQ59H18 835 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 TMEM53Q6P2H8 277 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 ANKRD13DQ6ZTN6 518 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 CCDC25Q86WR0 208 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 KSR1Q8IVT5 923 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 RIBC1Q8N443 379 aaPredicted RBP7.65□□□□□ -1.18
NECAP1-213ENST00000638883 GDAP1Q8TB36 358 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 RAB3IL1Q8TBN0 382 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 MKL1Q969V6 931 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 ZBED2Q9BTP6 218 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 CLIC5Q9NZA1 410 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 PCDHA13Q9Y5I0 950 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 CAPN6Q9Y6Q1 641 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 FPGT-TNNI3KV9GXZ4 949 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 KIF28PB7ZC32 967 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 ACTN4O43707 911 aaKnown RBP7.65□□□□□ -1.18
NECAP1-213ENST00000638883 F12P00748 615 aaPredicted RBP7.65□□□□□ -1.18
NECAP1-213ENST00000638883 ZBTB16Q05516 673 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 LMBRD2Q68DH5 695 aaPredicted RBP7.65□□□□□ -1.18
NECAP1-213ENST00000638883 IQCF2Q8IXL9 164 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 ZNF594Q96JF6 807 aaPredicted RBP7.65□□□□□ -1.18
NECAP1-213ENST00000638883 GPR101Q96P66 508 aaPredicted RBP7.65□□□□□ -1.18
NECAP1-213ENST00000638883 PRELID1Q9Y255 219 aa7.65□□□□□ -1.18
NECAP1-213ENST00000638883 REXO2Q9Y3B8 237 aaKnown RBP7.65□□□□□ -1.18
NECAP1-213ENST00000638883 CAPN9O14815 690 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 RAD51CO43502 376 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 DNAJC6O75061 913 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 SARSP49591 514 aaKnown RBP7.65□□□□□ -1.19
NECAP1-213ENST00000638883 METAP2P50579 478 aaKnown RBP eCLIP7.65□□□□□ -1.19
NECAP1-213ENST00000638883 OXCT1P55809 520 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 RPS6KA1Q15418 735 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 TCP11X2Q5H9J9 407 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 FAM182BQ5T319 152 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 LRRC8BQ6P9F7 803 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 MIGA2Q7L4E1 593 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 TRIM22Q8IYM9 498 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 MREGQ8N565 214 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 NKX2-3Q8TAU0 364 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 SPATA16Q9BXB7 569 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 BLZF1Q9H2G9 400 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 AZI2Q9H6S1 392 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 NMRK1Q9NWW6 199 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 TFCP2L1Q9NZI6 479 aa7.65□□□□□ -1.19
NECAP1-213ENST00000638883 RABL2AQ9UBK7 228 aaPredicted RBP7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms