RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 TMX3Q96JJ7 454 aa11.72□□□□□ -0.53
TMCO1-209ENST00000628579 JPH2Q9BR39 696 aaPredicted RBP11.72□□□□□ -0.53
TMCO1-209ENST00000628579 PLVAPQ9BX97 442 aa11.72□□□□□ -0.53
TMCO1-209ENST00000628579 NSUN3Q9H649 340 aaKnown RBP11.72□□□□□ -0.53
TMCO1-209ENST00000628579 ELAC1Q9H777 363 aaKnown RBP11.72□□□□□ -0.53
TMCO1-209ENST00000628579 UBE2ZQ9H832 354 aaPredicted RBP11.72□□□□□ -0.53
TMCO1-209ENST00000628579 MINDY3Q9H8M7 445 aa11.72□□□□□ -0.53
TMCO1-209ENST00000628579 XPNPEP1Q9NQW7 623 aa11.72□□□□□ -0.53
TMCO1-209ENST00000628579 TYW1Q9NV66 732 aaKnown RBP11.72□□□□□ -0.53
TMCO1-209ENST00000628579 COL4A3BPQ9Y5P4 624 aa11.72□□□□□ -0.53
TMCO1-209ENST00000628579 PLXNA4Q9HCM2 1894 aa11.72□□□□□ -0.53
TMCO1-209ENST00000628579 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.71□□□□□ -0.53
TMCO1-209ENST00000628579 A0A0U1RQF3 1178 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 LYPLA2O95372 231 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 SRGAP2CP0DJJ0 459 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 SPATA31C1P0DKV0 1188 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 KCNA5P22460 613 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 SFPQP23246 707 aaKnown RBP eCLIP11.71□□□□□ -0.53
TMCO1-209ENST00000628579 GTF2F1P35269 517 aaKnown RBP eCLIP11.71□□□□□ -0.53
TMCO1-209ENST00000628579 TECP42680 631 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 CDC42EP1Q00587 391 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 LAMTOR4Q0VGL1 99 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 GNL2Q13823 731 aaKnown RBP11.71□□□□□ -0.53
TMCO1-209ENST00000628579 LONRF3Q496Y0 759 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 TTC38Q5R3I4 469 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 SPOUT1Q5T280 376 aaKnown RBP11.71□□□□□ -0.53
TMCO1-209ENST00000628579 LRRC55Q6ZSA7 311 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 OTUD6AQ7L8S5 288 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 ZNF598Q86UK7 904 aaKnown RBP11.71□□□□□ -0.53
TMCO1-209ENST00000628579 IL27Q8NEV9 243 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 SPPL3Q8TCT6 385 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 PIGOQ8TEQ8 1089 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 PSPC1Q8WXF1 523 aaKnown RBP11.71□□□□□ -0.53
TMCO1-209ENST00000628579 TBC1D32Q96NH3 1257 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 CASD1Q96PB1 797 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 UHRF1Q96T88 793 aaPredicted RBP11.71□□□□□ -0.53
TMCO1-209ENST00000628579 CWH43Q9H720 699 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 UPF2Q9HAU5 1272 aaKnown RBP11.71□□□□□ -0.53
TMCO1-209ENST00000628579 PIN4Q9Y237 131 aaKnown RBP11.71□□□□□ -0.53
TMCO1-209ENST00000628579 PCDHGC5Q9Y5F6 944 aa11.71□□□□□ -0.53
TMCO1-209ENST00000628579 H3BQ06 376 aaPredicted RBP11.7□□□□□ -0.54
TMCO1-209ENST00000628579 MED24O75448 989 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 OR52Z1P0C646 297 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 U2AF2P26368 475 aaKnown RBP eCLIP11.7□□□□□ -0.54
TMCO1-209ENST00000628579 IRS1P35568 1242 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 PBX3P40426 434 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 RARRES1P49788 294 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 TOB1P50616 345 aaPredicted RBP11.7□□□□□ -0.54
TMCO1-209ENST00000628579 HYAL1Q12794 435 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 TWF2Q6IBS0 349 aaKnown RBP11.7□□□□□ -0.54
TMCO1-209ENST00000628579 CATSPER4Q7RTX7 472 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 FERMT3Q86UX7 667 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 CATSPER3Q86XQ3 398 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 COLGALT1Q8NBJ5 622 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 RNF149Q8NC42 400 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 NEK9Q8TD19 979 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 HELQQ8TDG4 1101 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 POF1BQ8WVV4 589 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 MTRQ99707 1265 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 TMEM117Q9H0C3 514 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 LMAN2LQ9H0V9 348 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 RNF216Q9NWF9 866 aaPredicted RBP11.7□□□□□ -0.54
TMCO1-209ENST00000628579 DACT1Q9NYF0 836 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 PPME1Q9Y570 386 aa11.7□□□□□ -0.54
TMCO1-209ENST00000628579 MEIS3P2A8K0S8 358 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 GAS2O43903 313 aaKnown RBP11.69□□□□□ -0.54
TMCO1-209ENST00000628579 PHKA2P46019 1235 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 COL19A1Q14993 1142 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 NAALADL2Q58DX5 795 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 POTEGQ6S5H5 508 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 EP400NLQ6ZTU2 488 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 ADGRD2Q7Z7M1 963 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 EXOC8Q8IYI6 725 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 THNSL1Q8IYQ7 743 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 ABI1Q8IZP0 508 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 C4orf32Q8N8J7 132 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.69□□□□□ -0.54
TMCO1-209ENST00000628579 ASAP3Q8TDY4 903 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 TCP11Q8WWU5 503 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 LPPQ93052 612 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 INO80BQ9C086 356 aaPredicted RBP11.69□□□□□ -0.54
TMCO1-209ENST00000628579 CHST12Q9NRB3 414 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 ANKEF1Q9NU02 776 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 AGPAT5Q9NUQ2 364 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 PCDHB6Q9Y5E3 794 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 PCDHB12Q9Y5F1 795 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 C5orf42Q9H799 3197 aa11.69□□□□□ -0.54
TMCO1-209ENST00000628579 BDP1A6H8Y1 2624 aa11.68□□□□□ -0.54
TMCO1-209ENST00000628579 TNFRSF10AO00220 468 aa11.68□□□□□ -0.54
TMCO1-209ENST00000628579 LINC01565O15544 149 aa11.68□□□□□ -0.54
TMCO1-209ENST00000628579 HOXA2O43364 376 aa11.68□□□□□ -0.54
TMCO1-209ENST00000628579 USO1O60763 962 aaKnown RBP11.68□□□□□ -0.54
TMCO1-209ENST00000628579 DGAT1O75907 488 aa11.68□□□□□ -0.54
TMCO1-209ENST00000628579 FGF18O76093 207 aa11.68□□□□□ -0.54
TMCO1-209ENST00000628579 EOMESO95936 686 aa11.68□□□□□ -0.54
TMCO1-209ENST00000628579 GJB2P29033 226 aa11.68□□□□□ -0.54
TMCO1-209ENST00000628579 HOXA11P31270 313 aaPredicted RBP11.68□□□□□ -0.54
TMCO1-209ENST00000628579 LTBRP36941 435 aa11.68□□□□□ -0.54
TMCO1-209ENST00000628579 TRAPPC10P48553 1259 aa11.68□□□□□ -0.54
TMCO1-209ENST00000628579 DLX2Q07687 328 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms