RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SNW1Q13573 536 aaKnown RBP15.86■□□□□ 0.13
SNX1-214ENST00000625244 NETO1Q8TDF5 533 aa15.86■□□□□ 0.13
SNX1-214ENST00000625244 EMILIN2Q9BXX0 1053 aa15.86■□□□□ 0.13
SNX1-214ENST00000625244 KRT23Q9C075 422 aa15.86■□□□□ 0.13
SNX1-214ENST00000625244 MAN1C1Q9NR34 630 aa15.86■□□□□ 0.13
SNX1-214ENST00000625244 SMG1Q96Q15 3661 aaKnown RBP15.86■□□□□ 0.13
SNX1-214ENST00000625244 IGF2RP11717 2491 aa15.86■□□□□ 0.13
SNX1-214ENST00000625244 EVPLQ92817 2033 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.85■□□□□ 0.13
SNX1-214ENST00000625244 KANSL1LA0AUZ9 987 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 MAFGO15525 162 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 TBC1D4O60343 1298 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 LILRB3O75022 631 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 SSBP05455 408 aaKnown RBP eCLIP15.85■□□□□ 0.13
SNX1-214ENST00000625244 GALTP07902 379 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 MYBP10242 640 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 HTR4Q13639 388 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 TSSK4Q6SA08 328 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 CYB5R4Q7L1T6 521 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 BBXQ8WY36 941 aaPredicted RBP15.85■□□□□ 0.13
SNX1-214ENST00000625244 SHDQ96IW2 340 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 RPP25Q9BUL9 199 aaKnown RBP15.85■□□□□ 0.13
SNX1-214ENST00000625244 SENP2Q9HC62 589 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 KCNH7Q9NS40 1196 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 GMEB2Q9UKD1 530 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 NUMBLQ9Y6R0 609 aa15.85■□□□□ 0.13
SNX1-214ENST00000625244 LAMA4Q16363 1823 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 IGKV6D-21A0A0A0MT36 114 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 INPPL1O15357 1258 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 RFPL2O75678 378 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 ATG7O95352 703 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 C22orf31O95567 290 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 LAMP2P13473 410 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 KCNA4P22459 653 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 PMLP29590 882 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 SLC26A2P50443 739 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 GPC5P78333 572 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 ZNF484Q5JVG2 852 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 METTL13Q8N6R0 699 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 DDX23Q9BUQ8 820 aaKnown RBP15.84■□□□□ 0.13
SNX1-214ENST00000625244 ADAMTS10Q9H324 1103 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 NRDE2Q9H7Z3 1164 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 COL1A2P08123 1366 aa15.84■□□□□ 0.13
SNX1-214ENST00000625244 GCN1Q92616 2671 aaKnown RBP15.83■□□□□ 0.13
SNX1-214ENST00000625244 LAMA1P25391 3075 aa15.83■□□□□ 0.12
SNX1-214ENST00000625244 FAM170BA6NMN3 283 aa15.83■□□□□ 0.12
SNX1-214ENST00000625244 MFAP1P55081 439 aaKnown RBP15.83■□□□□ 0.12
SNX1-214ENST00000625244 ITGB3BPQ13352 177 aaPredicted RBP15.83■□□□□ 0.12
SNX1-214ENST00000625244 UBXN2BQ14CS0 331 aa15.83■□□□□ 0.12
SNX1-214ENST00000625244 LPAL2Q16609 132 aa15.83■□□□□ 0.12
SNX1-214ENST00000625244 TICAM2Q86XR7 235 aa15.83■□□□□ 0.12
SNX1-214ENST00000625244 SDF4Q9BRK5 362 aa15.83■□□□□ 0.12
SNX1-214ENST00000625244 RHOBTB2Q9BYZ6 727 aa15.83■□□□□ 0.12
SNX1-214ENST00000625244 CNNM2Q9H8M5 875 aa15.83■□□□□ 0.12
SNX1-214ENST00000625244 DNAJB4Q9UDY4 337 aa15.83■□□□□ 0.12
SNX1-214ENST00000625244 FLNBO75369 2602 aaKnown RBP15.83■□□□□ 0.12
SNX1-214ENST00000625244 NFASCO94856 1347 aa15.83■□□□□ 0.12
SNX1-214ENST00000625244 PATJQ8NI35 1801 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 MIA3Q5JRA6 1907 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 BACH1O14867 736 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 B4GALT3O60512 393 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 CCNE2O96020 404 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 ATP4AP20648 1035 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 CD72P21854 359 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 FGFR4P22455 802 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 EIF4BP23588 611 aaKnown RBP15.82■□□□□ 0.12
SNX1-214ENST00000625244 SLC11A1P49279 550 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 CLCN3P51790 818 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 PDE1AP54750 535 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 NLRP11P59045 1033 aaKnown RBP15.82■□□□□ 0.12
SNX1-214ENST00000625244 TROAPQ12815 778 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 UBE2SQ16763 222 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 IMMTQ16891 758 aaKnown RBP15.82■□□□□ 0.12
SNX1-214ENST00000625244 LONRF3Q496Y0 759 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 CYP26C1Q6V0L0 522 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 GET4Q7L5D6 327 aaPredicted RBP15.82■□□□□ 0.12
SNX1-214ENST00000625244 CCDC60Q8IWA6 550 aaPredicted RBP15.82■□□□□ 0.12
SNX1-214ENST00000625244 SMG7Q92540 1137 aaKnown RBP15.82■□□□□ 0.12
SNX1-214ENST00000625244 LPPQ93052 612 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 ZNF707Q96C28 371 aaPredicted RBP15.82■□□□□ 0.12
SNX1-214ENST00000625244 ZNF668Q96K58 619 aaPredicted RBP15.82■□□□□ 0.12
SNX1-214ENST00000625244 TBC1D13Q9NVG8 400 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 DMXL2Q8TDJ6 3036 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 LAMA5O15230 3695 aa15.82■□□□□ 0.12
SNX1-214ENST00000625244 GDF9O60383 454 aa15.81■□□□□ 0.12
SNX1-214ENST00000625244 SHC2P98077 582 aa15.81■□□□□ 0.12
SNX1-214ENST00000625244 MLF2Q15773 248 aaPredicted RBP15.81■□□□□ 0.12
SNX1-214ENST00000625244 N4BP2L1Q5TBK1 243 aaPredicted RBP15.81■□□□□ 0.12
SNX1-214ENST00000625244 ABHD15Q6UXT9 468 aa15.81■□□□□ 0.12
SNX1-214ENST00000625244 FGF14Q92915 247 aa15.81■□□□□ 0.12
SNX1-214ENST00000625244 MXRA8Q9BRK3 442 aa15.81■□□□□ 0.12
SNX1-214ENST00000625244 OSBPL6Q9BZF3 934 aa15.81■□□□□ 0.12
SNX1-214ENST00000625244 GBP3Q9H0R5 595 aa15.81■□□□□ 0.12
SNX1-214ENST00000625244 PSTPIP2Q9H939 334 aa15.81■□□□□ 0.12
SNX1-214ENST00000625244 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.81■□□□□ 0.12
SNX1-214ENST00000625244 MEIS3P2A8K0S8 358 aa15.8■□□□□ 0.12
SNX1-214ENST00000625244 C2CD2LO14523 706 aa15.8■□□□□ 0.12
SNX1-214ENST00000625244 PROS1P07225 676 aa15.8■□□□□ 0.12
SNX1-214ENST00000625244 SLC44A4Q53GD3 710 aa15.8■□□□□ 0.12
SNX1-214ENST00000625244 FAM160B1Q5W0V3 765 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms