RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ZNF174Q15697 407 aa20.06■□□□□ 0.8
SCAMP4-213ENST00000621748 ECHDC2Q86YB7 292 aa20.06■□□□□ 0.8
SCAMP4-213ENST00000621748 KLHL23Q8NBE8 558 aa20.06■□□□□ 0.8
SCAMP4-213ENST00000621748 PRPF31Q8WWY3 499 aaKnown RBP20.06■□□□□ 0.8
SCAMP4-213ENST00000621748 LMAN2LQ9H0V9 348 aa20.06■□□□□ 0.8
SCAMP4-213ENST00000621748 NSUN3Q9H649 340 aaKnown RBP20.06■□□□□ 0.8
SCAMP4-213ENST00000621748 IFT122Q9HBG6 1241 aa20.06■□□□□ 0.8
SCAMP4-213ENST00000621748 COL4A3BPQ9Y5P4 624 aa20.06■□□□□ 0.8
SCAMP4-213ENST00000621748 A0A0U1RQF3 1178 aa20.05■□□□□ 0.8
SCAMP4-213ENST00000621748 POTEMA6NI47 508 aa20.05■□□□□ 0.8
SCAMP4-213ENST00000621748 LYPLA2O95372 231 aa20.05■□□□□ 0.8
SCAMP4-213ENST00000621748 CD2BP2O95400 341 aaKnown RBP20.05■□□□□ 0.8
SCAMP4-213ENST00000621748 NAALADL2Q58DX5 795 aa20.05■□□□□ 0.8
SCAMP4-213ENST00000621748 EXOC8Q8IYI6 725 aa20.05■□□□□ 0.8
SCAMP4-213ENST00000621748 SPPL3Q8TCT6 385 aa20.05■□□□□ 0.8
SCAMP4-213ENST00000621748 TYW1Q9NV66 732 aaKnown RBP20.05■□□□□ 0.8
SCAMP4-213ENST00000621748 PLXNA4Q9HCM2 1894 aa20.05■□□□□ 0.8
SCAMP4-213ENST00000621748 A0A087WWV3 80 aa20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 CSPG5O95196 566 aa20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 LAMTOR4Q0VGL1 99 aa20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 EMC2Q15006 297 aa20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 SPOUT1Q5T280 376 aaKnown RBP20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 LRRC55Q6ZSA7 311 aa20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 ZNF598Q86UK7 904 aaKnown RBP20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 NOSTRINQ8IVI9 506 aa20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 NEK9Q8TD19 979 aa20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 PSPC1Q8WXF1 523 aaKnown RBP20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 NECAB3Q96P71 396 aaPredicted RBP20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 CASD1Q96PB1 797 aa20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 UHRF1Q96T88 793 aaPredicted RBP20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 INO80BQ9C086 356 aaPredicted RBP20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 TMEM117Q9H0C3 514 aa20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 CWH43Q9H720 699 aa20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 XPNPEP1Q9NQW7 623 aa20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 CHST12Q9NRB3 414 aa20.04■□□□□ 0.8
SCAMP4-213ENST00000621748 SRGAP2CP0DJJ0 459 aa20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 SPATA31C1P0DKV0 1188 aa20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 ATF7P17544 494 aaPredicted RBP20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 KCNA5P22460 613 aa20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 SFPQP23246 707 aaKnown RBP eCLIP20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 TECP42680 631 aa20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 TTC38Q5R3I4 469 aa20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 RNF169Q8NCN4 708 aa20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 POF1BQ8WVV4 589 aa20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 TMX3Q96JJ7 454 aa20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 MINDY3Q9H8M7 445 aa20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 ANKEF1Q9NU02 776 aa20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 DACT1Q9NYF0 836 aa20.03■□□□□ 0.8
SCAMP4-213ENST00000621748 GAS2O43903 313 aaKnown RBP20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 EOMESO95936 686 aa20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 U2AF2P26368 475 aaKnown RBP eCLIP20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 ORC2Q13416 577 aaPredicted RBP20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 GNL2Q13823 731 aaKnown RBP20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 NBR1Q14596 966 aa20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 COL19A1Q14993 1142 aa20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 CLLU1OSQ5K130 101 aa20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 CATSPER4Q7RTX7 472 aa20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 FERMT3Q86UX7 667 aa20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 PIGOQ8TEQ8 1089 aa20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 TCP11Q8WWU5 503 aa20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 MTRQ99707 1265 aa20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 TRAIPQ9BWF2 469 aa20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 PIN4Q9Y237 131 aaKnown RBP20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 PCDHB12Q9Y5F1 795 aa20.02■□□□□ 0.8
SCAMP4-213ENST00000621748 BDP1A6H8Y1 2624 aa20.02■□□□□ 0.79
SCAMP4-213ENST00000621748 TNFRSF10AO00220 468 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 ASAP2O43150 1006 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 HOXA2O43364 376 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 OR52Z1P0C646 297 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 IRS1P35568 1242 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 PHKA2P46019 1235 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 RARRES1P49788 294 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 TOB1P50616 345 aaPredicted RBP20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 HYAL1Q12794 435 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 TWF2Q6IBS0 349 aaKnown RBP20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 CATSPER3Q86XQ3 398 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 HSCBQ8IWL3 235 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 C4orf32Q8N8J7 132 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 COLGALT1Q8NBJ5 622 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 PABPC5Q96DU9 382 aaKnown RBP20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 AAASQ9NRG9 546 aa20.01■□□□□ 0.79
SCAMP4-213ENST00000621748 MED24O75448 989 aa20■□□□□ 0.79
SCAMP4-213ENST00000621748 XRCC6P12956 609 aaKnown RBP eCLIP20■□□□□ 0.79
SCAMP4-213ENST00000621748 GTF2F1P35269 517 aaKnown RBP eCLIP20■□□□□ 0.79
SCAMP4-213ENST00000621748 TRAPPC10P48553 1259 aa20■□□□□ 0.79
SCAMP4-213ENST00000621748 LEXMQ3ZCV2 418 aa20■□□□□ 0.79
SCAMP4-213ENST00000621748 SRGAP1Q7Z6B7 1085 aa20■□□□□ 0.79
SCAMP4-213ENST00000621748 ABI1Q8IZP0 508 aa20■□□□□ 0.79
SCAMP4-213ENST00000621748 RNF149Q8NC42 400 aa20■□□□□ 0.79
SCAMP4-213ENST00000621748 HELQQ8TDG4 1101 aa20■□□□□ 0.79
SCAMP4-213ENST00000621748 TUFT1Q9NNX1 390 aa20■□□□□ 0.79
SCAMP4-213ENST00000621748 AGPAT5Q9NUQ2 364 aa20■□□□□ 0.79
SCAMP4-213ENST00000621748 H3BQ06 376 aaPredicted RBP19.99■□□□□ 0.79
SCAMP4-213ENST00000621748 DGAT1O75907 488 aa19.99■□□□□ 0.79
SCAMP4-213ENST00000621748 FGF18O76093 207 aa19.99■□□□□ 0.79
SCAMP4-213ENST00000621748 LTBRP36941 435 aa19.99■□□□□ 0.79
SCAMP4-213ENST00000621748 BECN1Q14457 450 aa19.99■□□□□ 0.79
SCAMP4-213ENST00000621748 CTC1Q2NKJ3 1217 aa19.99■□□□□ 0.79
SCAMP4-213ENST00000621748 LONRF3Q496Y0 759 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms