RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 MGEA5O60502 916 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 RPS6KA5O75582 802 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 SRGAP2CP0DJJ0 459 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 FGFR4P22455 802 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 DEFB103AP81534 67 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 CDC42EP1Q00587 391 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 MXD4Q14582 209 aaPredicted RBP15.88■□□□□ 0.13
CBWD3-217ENST00000621474 FAM102BQ5T8I3 360 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 RTN4RL1Q86UN2 441 aaPredicted RBP15.88■□□□□ 0.13
CBWD3-217ENST00000621474 PDILTQ8N807 584 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 RNF149Q8NC42 400 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 RASSF8Q8NHQ8 419 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 SEPT8Q92599 483 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 APBB2Q92870 758 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 PANK2Q9BZ23 570 aa15.88■□□□□ 0.13
CBWD3-217ENST00000621474 NPHP3-ACAD11A0A0J9YXS1 232 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 ABHD14A-ACY1A0A1B0GW23 586 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 ASAP2O43150 1006 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 HIP1RO75146 1068 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 ACTN1P12814 892 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 GUCY2CP25092 1073 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 TXLNAP40222 546 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 PTENP60484 403 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 POU5F1BQ06416 359 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 RAD51AP2Q09MP3 1159 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 PAK2Q13177 524 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 IKBKEQ14164 716 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 LRIT3Q3SXY7 679 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 ADALQ6DHV7 355 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.87■□□□□ 0.13
CBWD3-217ENST00000621474 IFNLR1Q8IU57 520 aaPredicted RBP15.87■□□□□ 0.13
CBWD3-217ENST00000621474 CHMP5Q9NZZ3 219 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 STK17AQ9UEE5 414 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 CCDC39Q9UFE4 941 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 ADGRA3Q8IWK6 1321 aa15.87■□□□□ 0.13
CBWD3-217ENST00000621474 ZBBXA8MT70 800 aa15.86■□□□□ 0.13
CBWD3-217ENST00000621474 SOX1O00570 391 aaPredicted RBP15.86■□□□□ 0.13
CBWD3-217ENST00000621474 SSBP05455 408 aaKnown RBP eCLIP15.86■□□□□ 0.13
CBWD3-217ENST00000621474 CACNB1Q02641 598 aaPredicted RBP15.86■□□□□ 0.13
CBWD3-217ENST00000621474 NFX1Q12986 1120 aaKnown RBP15.86■□□□□ 0.13
CBWD3-217ENST00000621474 HABP4Q5JVS0 413 aaKnown RBP15.86■□□□□ 0.13
CBWD3-217ENST00000621474 RRAGBQ5VZM2 374 aa15.86■□□□□ 0.13
CBWD3-217ENST00000621474 TMCO2Q7Z6W1 182 aaPredicted RBP15.86■□□□□ 0.13
CBWD3-217ENST00000621474 SCLT1Q96NL6 688 aa15.86■□□□□ 0.13
CBWD3-217ENST00000621474 NFKBIZQ9BYH8 718 aa15.86■□□□□ 0.13
CBWD3-217ENST00000621474 GCOM2Q9BZD3 368 aaPredicted RBP15.86■□□□□ 0.13
CBWD3-217ENST00000621474 KCND2Q9NZV8 630 aa15.86■□□□□ 0.13
CBWD3-217ENST00000621474 COL4A6Q14031 1691 aa15.86■□□□□ 0.13
CBWD3-217ENST00000621474 CHD7Q9P2D1 2997 aa15.86■□□□□ 0.13
CBWD3-217ENST00000621474 GRXCR1A8MXD5 290 aa15.86■□□□□ 0.13
CBWD3-217ENST00000621474 DHX8Q14562 1220 aaKnown RBP15.86■□□□□ 0.13
CBWD3-217ENST00000621474 CDCA2Q69YH5 1023 aaPredicted RBP15.86■□□□□ 0.13
CBWD3-217ENST00000621474 CCDC73Q6ZRK6 1079 aa15.86■□□□□ 0.13
CBWD3-217ENST00000621474 CRIPAKQ8N1N5 446 aa15.86■□□□□ 0.13
CBWD3-217ENST00000621474 ENPP3O14638 875 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 GPR182O15218 404 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 STAT6P42226 847 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 MBTD1Q05BQ5 628 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 DSC3Q14574 896 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 AMHR2Q16671 573 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 SRGAP1Q7Z6B7 1085 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 GPBP1Q86WP2 473 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 KIFAP3Q92845 792 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 REEP2Q9BRK0 252 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 KIFC3Q9BVG8 833 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 TSPYL2Q9H2G4 693 aaPredicted RBP15.85■□□□□ 0.13
CBWD3-217ENST00000621474 HPSEQ9Y251 543 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 SLC4A7Q9Y6M7 1214 aa15.85■□□□□ 0.13
CBWD3-217ENST00000621474 CHD9Q3L8U1 2897 aa15.84■□□□□ 0.13
CBWD3-217ENST00000621474 FAM237AA0A1B0GTK4 181 aa15.84■□□□□ 0.13
CBWD3-217ENST00000621474 A0A1B0GVL5 298 aa15.84■□□□□ 0.13
CBWD3-217ENST00000621474 MYMKA6NI61 221 aa15.84■□□□□ 0.13
CBWD3-217ENST00000621474 SFI1A8K8P3 1242 aa15.84■□□□□ 0.13
CBWD3-217ENST00000621474 EFCAB14O75071 495 aa15.84■□□□□ 0.13
CBWD3-217ENST00000621474 PFKFB1P16118 471 aa15.84■□□□□ 0.13
CBWD3-217ENST00000621474 CMA1P23946 247 aa15.84■□□□□ 0.13
CBWD3-217ENST00000621474 NAMPTP43490 491 aa15.84■□□□□ 0.13
CBWD3-217ENST00000621474 GIT2Q14161 759 aa15.84■□□□□ 0.13
CBWD3-217ENST00000621474 TIPINQ9BVW5 301 aa15.84■□□□□ 0.13
CBWD3-217ENST00000621474 FTHL17Q9BXU8 183 aa15.84■□□□□ 0.13
CBWD3-217ENST00000621474 MTIF3Q9H2K0 278 aaKnown RBP15.84■□□□□ 0.13
CBWD3-217ENST00000621474 LRRIQ4A6NIV6 560 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 POLR2DO15514 142 aaKnown RBP15.83■□□□□ 0.13
CBWD3-217ENST00000621474 EDN1P05305 212 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 ATP2A2P16615 1042 aaKnown RBP15.83■□□□□ 0.13
CBWD3-217ENST00000621474 SFPQP23246 707 aaKnown RBP eCLIP15.83■□□□□ 0.13
CBWD3-217ENST00000621474 HOXA11P31270 313 aaPredicted RBP15.83■□□□□ 0.13
CBWD3-217ENST00000621474 PHKA2P46019 1235 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 NPTX2P47972 431 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 ZNF131P52739 623 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 TFDP1Q14186 410 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 DHX58Q96C10 678 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 DNAJC19Q96DA6 116 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 DRC1Q96MC2 740 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 SLC9A7Q96T83 725 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 ADAM2Q99965 735 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 INO80BQ9C086 356 aaPredicted RBP15.83■□□□□ 0.13
CBWD3-217ENST00000621474 CCDC113Q9H0I3 377 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 GOLPH3LQ9H4A5 285 aa15.83■□□□□ 0.13
CBWD3-217ENST00000621474 KBTBD4Q9NVX7 518 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms