RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 LZTS2Q9BRK4 669 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 ZNF408Q9H9D4 720 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 KIF9Q9HAQ2 790 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 A1CFQ9NQ94 594 aaKnown RBP7.51□□□□□ -1.21
NEDD9-216ENST00000620854 STK17AQ9UEE5 414 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 SERPINB13Q9UIV8 391 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 PNMA3Q9UL41 463 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 UTRNP46939 3433 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 TNFAIP3P21580 790 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 PON1P27169 355 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 R3HDM1Q15032 1099 aaKnown RBP7.51□□□□□ -1.21
NEDD9-216ENST00000620854 ERMARDQ5T6L9 678 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 CIAPIN1Q6FI81 312 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 KCTD1Q719H9 257 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 RNF25Q96BH1 459 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-216ENST00000620854 POP1Q99575 1024 aaKnown RBP7.51□□□□□ -1.21
NEDD9-216ENST00000620854 YIPF3Q9GZM5 350 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 TAS2R14Q9NYV8 317 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.51□□□□□ -1.21
NEDD9-216ENST00000620854 TMEM59LQ9UK28 342 aa7.51□□□□□ -1.21
NEDD9-216ENST00000620854 TCP11X1B4DZS4 312 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 RBAK-RBAKDNI3L0D1 243 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 IGF2BP3O00425 579 aaKnown RBP eCLIP7.5□□□□□ -1.219e-6■■■□□ 18
NEDD9-216ENST00000620854 DDX3XO00571 662 aaKnown RBP eCLIP7.5□□□□□ -1.21
NEDD9-216ENST00000620854 AKAP3O75969 853 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 GCNT3O95395 438 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 MYBP10242 640 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 RPL13P26373 211 aaKnown RBP7.5□□□□□ -1.21
NEDD9-216ENST00000620854 RNASELQ05823 741 aaKnown RBP7.5□□□□□ -1.21
NEDD9-216ENST00000620854 XRCC4Q13426 336 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 DRP2Q13474 957 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 SNX1Q13596 522 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 PLCB4Q15147 1175 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 GALNT17Q6IS24 598 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 CCDC105Q8IYK2 499 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 NEK9Q8TD19 979 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 ACTRT1Q8TDG2 376 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 MTMR9Q96QG7 549 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 AIPL1Q9NZN9 384 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 TAL1P17542 331 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-216ENST00000620854 TBC1D10BQ4KMP7 808 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-216ENST00000620854 FAM47EQ6ZV65 393 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 PHLDB2Q86SQ0 1253 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 NT5DC3Q86UY8 548 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 SFR1Q86XK3 245 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 COL23A1Q86Y22 540 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-216ENST00000620854 PALB2Q86YC2 1186 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 LRRC57Q8N9N7 239 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 SLC16A10Q8TF71 515 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 ELMO3Q96BJ8 720 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 FAXDC2Q96IV6 333 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 CCDC17Q96LX7 622 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 CSRNP1Q96S65 589 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 FAM129AQ9BZQ8 928 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 ECT2Q9H8V3 914 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 CTTNBP2NLQ9P2B4 639 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 H0Y3Z8 333 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 DDX39AO00148 427 aaKnown RBP7.5□□□□□ -1.21
NEDD9-216ENST00000620854 MGRN1O60291 552 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 EVI5O60447 810 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 AFPP02771 609 aaKnown RBP7.5□□□□□ -1.21
NEDD9-216ENST00000620854 MARCKSL1P49006 195 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 MESDQ14696 234 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 AOC3Q16853 763 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 USH1GQ495M9 461 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 DCAF15Q66K64 600 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 FBXO33Q7Z6M2 555 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 TBC1D16Q8TBP0 767 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 FBXO41Q8TF61 875 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 HAS1Q92839 578 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 GANQ9H2C0 597 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 CTNNAL1Q9UBT7 734 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 TAF1P21675 1872 aa7.5□□□□□ -1.21
NEDD9-216ENST00000620854 IGSF9BQ9UPX0 1349 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 MYH1P12882 1939 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 MYH4Q9Y623 1939 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 CCDC189A1A4V9 331 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 RASGRF2O14827 1237 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ATMINO43313 823 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-216ENST00000620854 KRT5P13647 590 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 STAT1P42224 750 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ALDH5A1P51649 535 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ICA1Q05084 483 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 GRM1Q13255 1194 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 PRR16Q569H4 304 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 EAPPQ56P03 285 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-216ENST00000620854 AGBL2Q5U5Z8 902 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ARHGEF26Q96DR7 871 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 BTBD6Q96KE9 485 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 MPHOSPH6Q99547 160 aaKnown RBP7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ERP44Q9BS26 406 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 THAP2Q9H0W7 228 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 FAM114A2Q9NRY5 505 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ASIC3Q9UHC3 531 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 MTUS1Q9ULD2 1270 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ATXN2Q99700 1313 aaKnown RBP7.49□□□□□ -1.21
NEDD9-216ENST00000620854 CCDC169A6NNP5 214 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 CCDC188H7C350 402 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 ECE2O60344 883 aa7.49□□□□□ -1.21
NEDD9-216ENST00000620854 TRIM49P0CI25 452 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms