RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 NYAP2Q9P242 653 aa14.19□□□□□ -0.14
SKP2-209ENST00000620197 DNM3Q9UQ16 869 aa14.19□□□□□ -0.14
SKP2-209ENST00000620197 UTP11Q9Y3A2 253 aaKnown RBP14.19□□□□□ -0.14
SKP2-209ENST00000620197 PSME4Q14997 1843 aa14.19□□□□□ -0.14
SKP2-209ENST00000620197 SCN9AQ15858 1988 aa14.19□□□□□ -0.14
SKP2-209ENST00000620197 GAP43P17677 238 aa14.19□□□□□ -0.14
SKP2-209ENST00000620197 RPL13P26373 211 aaKnown RBP14.19□□□□□ -0.14
SKP2-209ENST00000620197 FMO5P49326 533 aa14.19□□□□□ -0.14
SKP2-209ENST00000620197 PEX5P50542 639 aa14.19□□□□□ -0.14
SKP2-209ENST00000620197 RINT1Q6NUQ1 792 aa14.19□□□□□ -0.14
SKP2-209ENST00000620197 SLC9A9Q8IVB4 645 aa14.19□□□□□ -0.14
SKP2-209ENST00000620197 SGSM3Q96HU1 749 aa14.19□□□□□ -0.14
SKP2-209ENST00000620197 RAB17Q9H0T7 212 aa14.19□□□□□ -0.14
SKP2-209ENST00000620197 AMFRQ9UKV5 643 aa14.19□□□□□ -0.14
SKP2-209ENST00000620197 EML1O00423 815 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 SSBP05455 408 aaKnown RBP eCLIP14.18□□□□□ -0.14
SKP2-209ENST00000620197 MAPK7Q13164 816 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 PABPC4Q13310 644 aaKnown RBP eCLIP14.18□□□□□ -0.14
SKP2-209ENST00000620197 ITIH4Q14624 930 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 SIX1Q15475 284 aaPredicted RBP14.18□□□□□ -0.14
SKP2-209ENST00000620197 CBWD6Q4V339 395 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 CBWD3Q5JTY5 395 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 CBWD5Q5RIA9 395 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 PALB2Q86YC2 1186 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 GMCL1P1Q8NEA9 526 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 UBLCP1Q8WVY7 318 aaPredicted RBP14.18□□□□□ -0.14
SKP2-209ENST00000620197 CHMP6Q96FZ7 201 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.18□□□□□ -0.141e-7■□□□□ 10.1
SKP2-209ENST00000620197 PCDHA1Q9Y5I3 950 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 BBOX1O75936 387 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 CTTNQ14247 550 aaKnown RBP14.18□□□□□ -0.14
SKP2-209ENST00000620197 PPP2R5AQ15172 486 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 UBAP2Q5T6F2 1119 aaKnown RBP14.18□□□□□ -0.14
SKP2-209ENST00000620197 APOBEC3HQ6NTF7 200 aaKnown RBP14.18□□□□□ -0.14
SKP2-209ENST00000620197 TATDN1Q6P1N9 297 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 TLDC1Q6P9B6 456 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 B3GNT9Q6UX72 402 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 VPS36Q86VN1 386 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 GLYCTKQ8IVS8 523 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 TAS2R14Q9NYV8 317 aa14.18□□□□□ -0.14
SKP2-209ENST00000620197 KDM4FA0A1W2PPD8 638 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 RFX1P22670 979 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 DR1Q01658 176 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 VPS72Q15906 364 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 ENOX2Q16206 610 aaKnown RBP14.17□□□□□ -0.14
SKP2-209ENST00000620197 MFSD5Q6N075 450 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 ERMNQ8TAM6 284 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 U2AF1L4Q8WU68 220 aaKnown RBP14.17□□□□□ -0.14
SKP2-209ENST00000620197 IKZF4Q9H2S9 585 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 COL2A1P02458 1487 aaPredicted RBP14.17□□□□□ -0.14
SKP2-209ENST00000620197 MEIS1O00470 390 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 GSTA1P08263 222 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 KCTD19Q17RG1 926 aaPredicted RBP14.17□□□□□ -0.14
SKP2-209ENST00000620197 CDC42EP5Q6NZY7 148 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 BTNL9Q6UXG8 535 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 JAMLQ86YT9 394 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 C12orf50Q8NA57 414 aaPredicted RBP14.17□□□□□ -0.14
SKP2-209ENST00000620197 CRAMP1Q96RY5 1269 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 WDR81Q562E7 1941 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 ANKRD62A6NC57 917 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 PPP2R5CQ13362 524 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 KIAA1755Q5JYT7 1200 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 TTC27Q6P3X3 843 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 HHIPL2Q6UWX4 724 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 COL23A1Q86Y22 540 aaPredicted RBP14.17□□□□□ -0.14
SKP2-209ENST00000620197 PARP9Q8IXQ6 854 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 PRELID2Q8N945 189 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 GMCL1Q96IK5 515 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 CCDC17Q96LX7 622 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 EIF2AK1Q9BQI3 630 aaKnown RBP14.17□□□□□ -0.14
SKP2-209ENST00000620197 THAP2Q9H0W7 228 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 TUFT1Q9NNX1 390 aa14.17□□□□□ -0.14
SKP2-209ENST00000620197 PHF20L1A8MW92 1017 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 MUTP22033 750 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 PSMC2P35998 433 aaKnown RBP14.16□□□□□ -0.14
SKP2-209ENST00000620197 DRAP1Q14919 205 aaPredicted RBP14.16□□□□□ -0.14
SKP2-209ENST00000620197 DCAF17Q5H9S7 520 aaPredicted RBP14.16□□□□□ -0.14
SKP2-209ENST00000620197 CCDC121Q6ZUS5 278 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 CACNA2D3Q8IZS8 1091 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 SLCO2A1Q92959 643 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 APEX2Q9UBZ4 518 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 CCNL1Q9UK58 526 aaPredicted RBP14.16□□□□□ -0.14
SKP2-209ENST00000620197 PHF2O75151 1096 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 PMS2P54278 862 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 MYBPC2Q14324 1141 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 PTPROQ16827 1216 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 GKAP1Q5VSY0 366 aaPredicted RBP14.16□□□□□ -0.14
SKP2-209ENST00000620197 PHLDB3Q6NSJ2 640 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 ZNF720Q7Z2F6 126 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 FMNL3Q8IVF7 1028 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 ART4Q93070 314 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 NAP1L3Q99457 506 aaPredicted RBP14.16□□□□□ -0.14
SKP2-209ENST00000620197 PNMA2Q9UL42 364 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 PMM2O15305 246 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 PSMD10O75832 226 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 SLITRK3O94933 977 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 SHROOM1Q2M3G4 852 aaPredicted RBP14.16□□□□□ -0.14
SKP2-209ENST00000620197 PRR16Q569H4 304 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 OTOP1Q7RTM1 612 aa14.16□□□□□ -0.14
SKP2-209ENST00000620197 FAM186BQ8IYM0 893 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms