RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 RPL26L1Q9UNX3 145 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 SMCO2A6NFE2 343 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 GJB6O95452 261 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 PPARGP37231 505 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 IGBP1P78318 339 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CYP4A11Q02928 519 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ART3Q13508 389 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CYP4A22Q5TCH4 519 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 C1orf54Q8WWF1 131 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 PPWD1Q96BP3 646 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 PCIF1Q9H4Z3 704 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SPC25Q9HBM1 224 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 L3MBTL1Q9Y468 752 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 BAZ1AQ9NRL2 1556 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 LAD1O00515 517 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 PSMA3P25788 255 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CAPRIN1Q14444 709 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 CEP55Q53EZ4 464 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CLMNQ96JQ2 1002 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ACSS2Q9NR19 701 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SENP1Q9P0U3 644 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 TEX14Q8IWB6 1497 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ADCY6O43306 1168 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SH3BP5O60239 455 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 KCNA1Q09470 495 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SYDE1Q6ZW31 735 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 SPATA4Q8NEY3 305 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CUL5Q93034 780 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CNOT7Q9UIV1 285 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 POLA1P09884 1462 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 FAM107AO95990 144 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 GYS1P13807 737 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CASP2P42575 452 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 MTERF3Q96E29 417 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SH3GL1Q99961 368 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 MMTAG2Q9BU76 263 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 C6orf50Q9HD87 102 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 PCP11498 1178 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 ADCY1Q08828 1119 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ZNF384Q8TF68 577 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CCDC90BQ9GZT6 254 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 AATFQ9NY61 560 aaKnown RBP eCLIP3.29□□□□□ -1.88
NEB-220ENST00000618972 WDR37Q9Y2I8 494 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SCAF11Q99590 1463 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 KRIT1O00522 736 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 GGPS1O95749 300 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SCNN1DP51172 638 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 PDE4DQ08499 809 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 TXNRD1Q16881 649 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ATP13A4Q4VNC1 1196 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SH3GL2Q99962 352 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 EMC3Q9P0I2 261 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 DDX20Q9UHI6 824 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 GUCY1B2O75343 617 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SNUPNO95149 360 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 MSH2P43246 934 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 JAG1P78504 1218 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 LAMB3Q13751 1172 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SPIDRQ14159 915 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ADSSL1Q8N142 457 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ZBTB10Q96DT7 871 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 DISC1Q9NRI5 854 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 BTBD7Q9P203 1132 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 TSC22D4Q9Y3Q8 395 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 MAGEB16A2A368 324 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SGSM3Q96HU1 749 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 USP42Q9H9J4 1324 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 FKBP14Q9NWM8 211 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 TRPC6Q9Y210 931 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 MAP3K13O43283 966 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 CRLF3Q8IUI8 442 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 OGFOD1Q8N543 542 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 TRIM51Q9BSJ1 452 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 MROH7-TTC4A0A0A0MT08 1334 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 ANKRD33BA6NCL7 494 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 TLR2O60603 784 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 POLR2BP30876 1174 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 RNF25Q96BH1 459 aaPredicted RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 TMEM191CA6NGB0 347 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 SPAG7O75391 227 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 TMEM191BP0C7N4 346 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 STAT6P42226 847 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 RUNDC3AQ59EK9 446 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 PPP4R4Q6NUP7 873 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 WDR93Q6P2C0 686 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 TRIM47Q96LD4 638 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 RALGAPBQ86X10 1494 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 ITIH2P19823 946 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 SERPINB6P35237 376 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 ITGA9Q13797 1035 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 KAZNQ674X7 775 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 PIGOQ8TEQ8 1089 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 MAML1Q92585 1016 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 RANBP17Q9H2T7 1088 aaKnown RBP3.28□□□□□ -1.88
NEB-220ENST00000618972 CARMIL2Q6F5E8 1435 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 LRRC10BA6NIK2 292 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 FKBP6O75344 327 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 ECE1P42892 770 aa3.28□□□□□ -1.88
NEB-220ENST00000618972 AP1S2P56377 157 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms