RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 STAP2Q9UGK3 403 aa11.9□□□□□ -0.51
CCDC144B-208ENST00000618081 ZRANB2O95218 330 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 FCER1AP12319 257 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 NR1D1P20393 614 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 ZNF302Q9NR11 478 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 DNAJC17Q9NVM6 304 aaKnown RBP11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 RPSAP08865 295 aaKnown RBP11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 SKIV2LQ15477 1246 aaKnown RBP11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 AP1ARQ63HQ0 302 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 SRPK1Q96SB4 655 aaKnown RBP11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 ADCY10Q96PN6 1610 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 CTTNQ14247 550 aaKnown RBP11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 KLHL38Q2WGJ6 581 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 EGFL8Q99944 293 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 HINFPQ9BQA5 517 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 ARHGAP10A1A4S6 786 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 VCPP55072 806 aaKnown RBP11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 EFTUD2Q15029 972 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 RASSF3Q86WH2 238 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 RHPN2Q8IUC4 686 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 LCORLQ8N3X6 602 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 NDE1Q9NXR1 346 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 TJP2Q9UDY2 1190 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 CEP152O94986 1710 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 KCNQ3O43525 872 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 KCNA4P22459 653 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 TAP1Q03518 808 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 TFDP2Q14188 446 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 LLGL1Q15334 1064 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 FOPNLQ96NB1 174 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 TMEM60Q9H2L4 133 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 CCDC188H7C350 402 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 ZBTB5O15062 677 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 ASAP2O43150 1006 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 PRAMEP78395 509 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 LBRQ14739 615 aaKnown RBP11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 MEI1Q5TIA1 1274 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 HEATR6Q6AI08 1181 aaKnown RBP11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 RRM2BQ7LG56 351 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 MFN1Q8IWA4 741 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 SENP1Q9P0U3 644 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 HEG1Q9ULI3 1381 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 GYG2O15488 501 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 ZNF500O60304 480 aaPredicted RBP11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 ALDH1A1P00352 501 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 HLA-DPA1P20036 260 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 TRIM72Q6ZMU5 477 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 TMCO5AQ8N6Q1 288 aa11.89□□□□□ -0.51
CCDC144B-208ENST00000618081 ZNF263O14978 683 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 CCNE1P24864 410 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 OCA2Q04671 838 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 DPCR1Q3MIW9 517 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 ZHX2Q9Y6X8 837 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 SOWAHDA6NJG2 315 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 MIF4GDA9UHW6 222 aaKnown RBP11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 IFNAR1P17181 557 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 EFHC2Q5JST6 749 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 PPP1R18Q6NYC8 613 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 TRIML2Q8N7C3 387 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 SAYSD1Q9NPB0 183 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 ZSWIM5Q9P217 1185 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 ZMYND10O75800 440 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 ARIH2O95376 493 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 GH2P01242 217 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 CC2D1AQ6P1N0 951 aaPredicted RBP11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 KCNV1Q6PIU1 500 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 GOLGA8IPA6NC78 632 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 GOLGA8JA6NMD2 632 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 FGGP02679 453 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 MAP4P27816 1152 aaKnown RBP11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 LIFRP42702 1097 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 KRT76Q01546 638 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 NNTQ13423 1086 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 TMED1Q13445 227 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 TMEM270Q6UE05 265 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 CNPY4Q8N129 248 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 XXYLT1Q8NBI6 393 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 GPT2Q8TD30 523 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 PIGOQ8TEQ8 1089 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 WRNIP1Q96S55 665 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 PCDHGB4Q9UN71 923 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 SNX5Q9Y5X3 404 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 MYBL1P10243 752 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 ORC2Q13416 577 aaPredicted RBP11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 KHDRBS2Q5VWX1 349 aaKnown RBP11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 NSUN6Q8TEA1 469 aaKnown RBP11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 DCUN1D1Q96GG9 259 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 AP1M1Q9BXS5 423 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 PITPNM3Q9BZ71 974 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 BHMT2Q9H2M3 363 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 SPATS2LQ9NUQ6 558 aaKnown RBP11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 DDX56Q9NY93 547 aaKnown RBP11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 MICAL3Q7RTP6 2002 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 RASA4BC9J798 803 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 HMGB3O15347 200 aaKnown RBP11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 RASA4O43374 803 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 DTNBO60941 627 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 NR5A1Q13285 461 aa11.88□□□□□ -0.51
CCDC144B-208ENST00000618081 THEMIS2Q5TEJ8 643 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms