RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 SALL4Q9UJQ4 1053 aa19.14■□□□□ 0.65
CNOT3-209ENST00000617930 DNAJC25-GNG10A0A024R161 153 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 CTAGE9A4FU28 777 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 ENC1O14682 589 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 UCHL3P15374 230 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 EXOC3L4Q17RC7 722 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 CBWD6Q4V339 395 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 CBWD3Q5JTY5 395 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 CBWD5Q5RIA9 395 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 SFMBT2Q5VUG0 894 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 KIAA1328Q86T90 577 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 RABGGTAQ92696 567 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 KIFC3Q9BVG8 833 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 AIPL1Q9NZN9 384 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 HDAC6Q9UBN7 1215 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 PFASO15067 1338 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 POTEB2H3BUK9 544 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 IGF2BP3O00425 579 aaKnown RBP eCLIP19.13■□□□□ 0.65
CNOT3-209ENST00000617930 SLC16A4O15374 487 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 ATP8B1O43520 1251 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 SLC25A27O95847 323 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 TRIM49P0CI25 452 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 TRIM49CP0CI26 452 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 MAPTP10636 758 aaKnown RBP19.13■□□□□ 0.65
CNOT3-209ENST00000617930 ATP4AP20648 1035 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 PLA2G4AP47712 749 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 PEX3P56589 373 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 ACTR2P61160 394 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 GTF2BQ00403 316 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 HAUS6Q7Z4H7 955 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 IRF2BP2Q7Z5L9 587 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 SLC9A9Q8IVB4 645 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 RDH13Q8NBN7 331 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 DNERQ8NFT8 737 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 RDM1Q8NG50 284 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 NAPGQ99747 312 aaPredicted RBP19.13■□□□□ 0.65
CNOT3-209ENST00000617930 CBWD1Q9BRT8 395 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 MKNK1Q9BUB5 465 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 PCIF1Q9H4Z3 704 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 JPH1Q9HDC5 661 aaPredicted RBP19.13■□□□□ 0.65
CNOT3-209ENST00000617930 PDLIM7Q9NR12 457 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 CDC23Q9UJX2 597 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 SLC45A1Q9Y2W3 748 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 NFASCO94856 1347 aa19.13■□□□□ 0.65
CNOT3-209ENST00000617930 SSU72P8A0A1W2PR75 194 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 FAM193AP78312 1265 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 DLG4P78352 724 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 ARID5AQ03989 594 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 CC2D1AQ6P1N0 951 aaPredicted RBP19.12■□□□□ 0.65
CNOT3-209ENST00000617930 HS2ST1Q7LGA3 356 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 SLC9A2Q9UBY0 812 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 PLXNB2O15031 1838 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 ATP1A1P05023 1023 aaKnown RBP19.12■□□□□ 0.65
CNOT3-209ENST00000617930 NCKAP1LP55160 1127 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 RAPGEF1Q13905 1077 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 FAM102BQ5T8I3 360 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 IFIH1Q9BYX4 1025 aaKnown RBP19.12■□□□□ 0.65
CNOT3-209ENST00000617930 MAF1Q9H063 256 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 ST6GALNAC4Q9H4F1 302 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 MLXIPQ9HAP2 919 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 XPNPEP1Q9NQW7 623 aa19.12■□□□□ 0.65
CNOT3-209ENST00000617930 MACROD2A1Z1Q3 448 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 RBAK-RBAKDNI3L0D1 243 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 AKR1B10O60218 316 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 LRRN2O75325 713 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 SERPING1P05155 500 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 STXBP4Q6ZWJ1 553 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 CYFIP1Q7L576 1253 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 SYCP3Q8IZU3 236 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 CEP112Q8N8E3 955 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 PLEKHO2Q8TD55 490 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 IWS1Q96ST2 819 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 ZIC5Q96T25 663 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 PNMA3Q9UL41 463 aa19.11■□□□□ 0.65
CNOT3-209ENST00000617930 KRT86O43790 486 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 ADSSP30520 456 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 NPTX2P47972 431 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 FMO5P49326 533 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 ZNF157P51786 506 aaPredicted RBP19.1■□□□□ 0.65
CNOT3-209ENST00000617930 JAM2P57087 298 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 CHMP4BP1P59074 171 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 SPA17Q15506 151 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 STXBP2Q15833 593 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 C1orf220Q5T0J3 134 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 WDR78Q5VTH9 848 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 SRGAP1Q7Z6B7 1085 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 TMEM161BQ8NDZ6 487 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 PARD6BQ9BYG5 372 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 ARFGAP3Q9NP61 516 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 GCNT4Q9P109 453 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 PUF60Q9UHX1 559 aaKnown RBP19.1■□□□□ 0.65
CNOT3-209ENST00000617930 CAPN6Q9Y6Q1 641 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 MYH11P35749 1972 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 LOXHD1Q8IVV2 1947 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 ADGRA3Q8IWK6 1321 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 A0A087X0T9 212 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 EIF3JO75822 258 aaKnown RBP19.1■□□□□ 0.65
CNOT3-209ENST00000617930 STAM2O75886 525 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 FAM228BP0C875 321 aa19.1■□□□□ 0.65
CNOT3-209ENST00000617930 ICAM3P32942 547 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms