RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.91□□□□□ -1.14
PDE6A-205ENST00000617647 PAIP1Q9H074 479 aaKnown RBP7.91□□□□□ -1.14
PDE6A-205ENST00000617647 KIAA1683Q9H0B3 1180 aa7.91□□□□□ -1.14
PDE6A-205ENST00000617647 SMYD3Q9H7B4 428 aa7.91□□□□□ -1.14
PDE6A-205ENST00000617647 ATP11BQ9Y2G3 1177 aa7.91□□□□□ -1.14
PDE6A-205ENST00000617647 RSPH10B2B2RC85 870 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 MATN2O00339 956 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 ADCY6O43306 1168 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 RSPH10BP0C881 870 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 HSPD1P10809 573 aaKnown RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 PTPN4P29074 926 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 KRT2P35908 639 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 POLR2FP61218 127 aaKnown RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 LSAMPQ13449 338 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 TRIP10Q15642 601 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 TMEM214Q6NUQ4 689 aaKnown RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 DPY19L2Q6NUT2 758 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 PIGWQ7Z7B1 504 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 SATL1Q86VE3 508 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 C1orf131Q8NDD1 294 aaKnown RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 PPP1R14CQ8TAE6 165 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 ATP8B4Q8TF62 1192 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 DGCR14Q96DF8 476 aaKnown RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 DSCC1Q9BVC3 393 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 OXCT2Q9BYC2 517 aaPredicted RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 MRPL1Q9BYD6 325 aaKnown RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 DENND2DQ9H6A0 471 aaPredicted RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 TRPC7Q9HCX4 862 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 ADAMTS1Q9UHI8 967 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 SRPRBQ9Y5M8 271 aaKnown RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 GPC6Q9Y625 555 aaPredicted RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 RNF113AO15541 343 aaKnown RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 GAS8O95995 478 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 KRT18P05783 430 aaKnown RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 CA4P22748 312 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 PRCPP42785 496 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 CPA2P48052 419 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 BASP1P80723 227 aaKnown RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 TAF1BQ53T94 588 aaPredicted RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 SEL1L2Q5TEA6 688 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 EPM2AIP1Q7L775 607 aaPredicted RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 TMC3Q7Z5M5 1100 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 CMTR1Q8N1G2 835 aaKnown RBP7.9□□□□□ -1.14
PDE6A-205ENST00000617647 TLR10Q9BXR5 811 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 NUF2Q9BZD4 464 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 BHMT2Q9H2M3 363 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 NPHS2Q9NP85 383 aa7.9□□□□□ -1.14
PDE6A-205ENST00000617647 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.9□□□□□ -1.15
PDE6A-205ENST00000617647 B4E1Z4 1266 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 POC1B-GALNT4F8VUJ3 575 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 MGEA5O60502 916 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 IDH1O75874 414 aaKnown RBP7.9□□□□□ -1.15
PDE6A-205ENST00000617647 PAEPP09466 180 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 HSPA8P11142 646 aaKnown RBP7.9□□□□□ -1.15
PDE6A-205ENST00000617647 PPP2R5CQ13362 524 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 UAP1Q16222 522 aaPredicted RBP7.9□□□□□ -1.15
PDE6A-205ENST00000617647 PPP2R5EQ16537 467 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 TMEM266Q2M3C6 531 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 PARP6Q2NL67 630 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 TRIM16LQ309B1 348 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 ZNF394Q53GI3 561 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 RABGAP1LQ5R372 815 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 OR52E8Q6IFG1 317 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 KBTBD3Q8NAB2 608 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 LSM14BQ9BX40 385 aaKnown RBP7.9□□□□□ -1.15
PDE6A-205ENST00000617647 GID8Q9NWU2 228 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 TRNAU1APQ9NX07 287 aaKnown RBP7.9□□□□□ -1.15
PDE6A-205ENST00000617647 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.15
PDE6A-205ENST00000617647 TACC3Q9Y6A5 838 aa7.9□□□□□ -1.15
PDE6A-205ENST00000617647 GOLGA8TH3BQL2 631 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 TSPAN9O75954 239 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 GOLGA8HP0CJ92 632 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 HARSP12081 509 aaKnown RBP7.89□□□□□ -1.15
PDE6A-205ENST00000617647 ALADP13716 330 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 ATICP31939 592 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 AMPD3Q01432 767 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 AP1B1Q10567 949 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 SPARCL1Q14515 664 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 PSMD6Q15008 389 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 PDCD4Q53EL6 469 aaKnown RBP7.89□□□□□ -1.15
PDE6A-205ENST00000617647 IYDQ6PHW0 289 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 BARGINQ6ZT62 677 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 C3orf67Q6ZVT6 689 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 COL23A1Q86Y22 540 aaPredicted RBP7.89□□□□□ -1.15
PDE6A-205ENST00000617647 CROCCP3Q8IVE0 287 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 CEP295NLQ96MC4 621 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 RNF39Q9H2S5 420 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 GOLPH3Q9H4A6 298 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 SLITRK6Q9H5Y7 841 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.89□□□□□ -1.15
PDE6A-205ENST00000617647 DIP2CQ9Y2E4 1556 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 PITPNM2Q9BZ72 1349 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 PPP1R3GB7ZBB8 358 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 RASA4BC9J798 803 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 GRM8O00222 908 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 GIPC1O14908 333 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 XPO1O14980 1071 aaKnown RBP7.89□□□□□ -1.15
PDE6A-205ENST00000617647 RASA4O43374 803 aa7.89□□□□□ -1.15
PDE6A-205ENST00000617647 HNRNPCL1O60812 293 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms