RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 APAF1O14727 1248 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 SART1O43290 800 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 ITGAVP06756 1048 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 TCP11X2Q5H9J9 407 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 SNX30Q5VWJ9 437 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 RAB44Q7Z6P3 723 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 SCUBE3Q8IX30 993 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 OXR1Q8N573 874 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 MAGED2Q9UNF1 606 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 FRMPD2Q68DX3 1309 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 MKRN4PQ13434 485 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 PAN2Q504Q3 1202 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 WDR45BQ5MNZ6 344 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 FNBP4Q8N3X1 1017 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 RTP3Q9BQQ7 232 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.61□□□□□ -1.83
LPP-220ENST00000617246 NENFQ9UMX5 172 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 CYP2C9P11712 490 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 KRT20P35900 424 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 NCKAP1LP55160 1127 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 NOP14P78316 857 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 FYB2Q5VWT5 728 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 XRRA1Q6P2D8 792 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 DENND1AQ8TEH3 1009 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 CLSTN2Q9H4D0 955 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 NEUROD4Q9HD90 331 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 MAGEB2O15479 319 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 ASAP2O43150 1006 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 CLTBP09497 229 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 GTF2E2P29084 291 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 HMGCS2P54868 508 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 NMIQ13287 307 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 SLFN12LQ6IEE8 588 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 NEK11Q8NG66 645 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 DPF2Q92785 391 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 OTUB1Q96FW1 271 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 TLE6Q9H808 572 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 CKMP06732 381 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 DCAF17Q5H9S7 520 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 IZUMO3Q5VZ72 239 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 ATP2A3Q93084 1043 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 GLIS2Q9BZE0 524 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 CCDC8Q9H0W5 538 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 USP29Q9HBJ7 922 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 OLA1Q9NTK5 396 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 A6NCN8 305 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 GDF11O95390 407 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 FESP07332 822 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 HSPA8P11142 646 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 TOP1P11387 765 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 LAMB3Q13751 1172 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 FOXR1Q6PIV2 292 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 CCDC63Q8NA47 563 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 HSPH1Q92598 858 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 OMDQ99983 421 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 PDGFDQ9GZP0 370 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 ABHD16BQ9H3Z7 469 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 HBS1LQ9Y450 684 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 VPS41P49754 854 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 MTMR1Q13613 665 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 MTMR3Q13615 1198 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 OTOP3Q7RTS5 596 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 NLRP4Q96MN2 994 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 TRERF1Q96PN7 1200 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 RNF113AO15541 343 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 RNF8O76064 485 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 DNTTP04053 509 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 PTPN3P26045 913 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 HNRNPDQ14103 355 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 PRR5LQ6MZQ0 368 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 AFAP1L1Q8TED9 768 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 ZBTB1Q9Y2K1 713 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 MIA3Q5JRA6 1907 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 KDM3BQ7LBC6 1761 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 KELP23276 732 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 KRT9P35527 623 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 SEMA3FQ13275 785 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 TMEM31Q5JXX7 168 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 EIF3CQ99613 913 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 SH2B1Q9NRF2 756 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 CREB1P16220 341 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 PNPLA4P41247 253 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 GUCA1AP43080 201 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 SLC26A2P50443 739 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 PAPOLAP51003 745 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 VASH1Q7L8A9 365 aaPredicted RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 AVL9Q8NBF6 648 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 TM9SF4Q92544 642 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 JAKMIP1Q96N16 626 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 GPR88Q9GZN0 384 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 PLEKHA5Q9HAU0 1116 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 DSEQ9UL01 958 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 PPME1Q9Y570 386 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 ZNFX1Q9P2E3 1918 aaKnown RBP3.61□□□□□ -1.83
LPP-220ENST00000617246 TMX2-CTNND1H3BSU7 103 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 PSEN2P49810 448 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 KRT40Q6A162 431 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 EEPD1Q7L9B9 569 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 LMBR1Q8WVP7 490 aa3.61□□□□□ -1.83
LPP-220ENST00000617246 SELENOOQ9BVL4 669 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms