RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ARHGAP20Q9P2F6 1191 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 A0A087X0T9 212 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 FAM228BP0C875 321 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 GPC5P78333 572 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 MKRN3Q13064 507 aaKnown RBP14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 R3HDM1Q15032 1099 aaKnown RBP14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 GLE1Q53GS7 698 aaKnown RBP14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 B4GALNT4Q76KP1 1039 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 THNSL1Q8IYQ7 743 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 EXOC4Q96A65 974 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 JPH2Q9BR39 696 aaPredicted RBP14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 AKT3Q9Y243 479 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 SPEF2Q9C093 1822 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 P4HA1P13674 534 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 INPP5BP32019 993 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 HERVK_113P62684 666 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 SLFN12LQ6IEE8 588 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 ZNF668Q96K58 619 aaPredicted RBP14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 MMTAG2Q9BU76 263 aaKnown RBP14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 MRIQ9BWK5 157 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 STK33Q9BYT3 514 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 IQCGQ9H095 443 aaKnown RBP14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 NKIRAS1Q9NYS0 192 aa14.23□□□□□ -0.13
PPP4R3B-206ENST00000616407 CCDC188H7C350 402 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 CLDN3O15551 220 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 PLS3P13797 630 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 ABCD1P33897 745 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 APBA1Q02410 837 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 UAP1Q16222 522 aaPredicted RBP14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 FAM81BQ96LP2 452 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 GGA3Q9NZ52 723 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 SAMD15Q9P1V8 674 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 APEX2Q9UBZ4 518 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 PASKQ96RG2 1323 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 GALCP54803 685 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 ZNF394Q53GI3 561 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 LMBRD2Q68DH5 695 aaPredicted RBP14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 CNOT8Q9UFF9 292 aaKnown RBP14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 EIF3DO15371 548 aaKnown RBP eCLIP14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 SGO2Q562F6 1265 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 IPO4Q8TEX9 1081 aaKnown RBP14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 GOLPH3Q9H4A6 298 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 AGPAT3Q9NRZ7 376 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 ZNF148Q9UQR1 794 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 COL1A1P02452 1464 aaPredicted RBP14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 ROBO1Q9Y6N7 1651 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 A0A0U1RQJ8 604 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 MEIS2O14770 477 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 AKAP3O75969 853 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 TBC1D8O95759 1140 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 POLR2BP30876 1174 aaKnown RBP14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 YARSP54577 528 aaKnown RBP14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 CCNA1P78396 465 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 CROCCP2Q86T23 111 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 KCTD17Q8N5Z5 321 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 TRIM11Q96F44 468 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 CAPN6Q9Y6Q1 641 aa14.22□□□□□ -0.13
PPP4R3B-206ENST00000616407 ROBO3Q96MS0 1386 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 GOLGA8SH3BPF8 625 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 ATP5DP30049 168 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 FKBP1AP62942 108 aaKnown RBP14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 DR1Q01658 176 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 TKFCQ3LXA3 575 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 WHAMMQ8TF30 809 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 COG1Q8WTW3 980 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 EML1O00423 815 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 WNT10BO00744 389 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 ATP2A2P16615 1042 aaKnown RBP14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 GGCXP38435 758 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 SCARA5Q6ZMJ2 495 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 FBXL13Q8NEE6 735 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 RFFLQ8WZ73 363 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 PLCB1Q9NQ66 1216 aa14.21□□□□□ -0.13
PPP4R3B-206ENST00000616407 SLIT2O94813 1529 aa14.21□□□□□ -0.14
PPP4R3B-206ENST00000616407 LDHAP00338 332 aaKnown RBP14.21□□□□□ -0.14
PPP4R3B-206ENST00000616407 NAB2Q15742 525 aa14.21□□□□□ -0.14
PPP4R3B-206ENST00000616407 ARMC9Q7Z3E5 817 aa14.21□□□□□ -0.14
PPP4R3B-206ENST00000616407 TRIM59Q8IWR1 403 aa14.21□□□□□ -0.14
PPP4R3B-206ENST00000616407 ANKRD36BP1Q96IX9 119 aa14.21□□□□□ -0.14
PPP4R3B-206ENST00000616407 MKNK1Q9BUB5 465 aa14.21□□□□□ -0.14
PPP4R3B-206ENST00000616407 KIAA1586Q9HCI6 787 aa14.21□□□□□ -0.14
PPP4R3B-206ENST00000616407 ANAPC7Q9UJX3 599 aa14.21□□□□□ -0.14
PPP4R3B-206ENST00000616407 CYP26A1O43174 497 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 STAM2O75886 525 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 NNTQ13423 1086 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 ALS2CLQ60I27 953 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 FAM83AQ86UY5 434 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 PASD1Q8IV76 773 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 TAB3Q8N5C8 712 aaPredicted RBP14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 GRK7Q8WTQ7 553 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 AGPAT1Q99943 283 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 HSD3B7Q9H2F3 369 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 GPRC5CQ9NQ84 441 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 C19orf81C9J6K1 198 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 ZBTB39O15060 712 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 TFRCP02786 760 aaKnown RBP14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 H2AFXP16104 143 aaPredicted RBP14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 PON1P27169 355 aa14.2□□□□□ -0.14
PPP4R3B-206ENST00000616407 SLC8A3P57103 927 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms