RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 BASP1P80723 227 aaKnown RBP9.78□□□□□ -0.84
SPTBN1-207ENST00000615901 SNCBQ16143 134 aa9.78□□□□□ -0.84
SPTBN1-207ENST00000615901 KCTD16Q68DU8 428 aa9.78□□□□□ -0.84
SPTBN1-207ENST00000615901 TRIM62Q9BVG3 475 aa9.78□□□□□ -0.84
SPTBN1-207ENST00000615901 CXCR5P32302 372 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 SOX5P35711 763 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 COG7P83436 770 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 PDIA6Q15084 440 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 CAPN12Q6ZSI9 719 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 GPD1LQ8N335 351 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 SRBD1Q8N5C6 995 aaKnown RBP9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 RBM46Q8TBY0 533 aaKnown RBP9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 MMP19Q99542 508 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 HAUS8Q9BT25 410 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 HSPA8P11142 646 aaKnown RBP9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 NFKBIAP25963 317 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 CASP8Q14790 479 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 ZNF568Q3ZCX4 644 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 KLC3Q6P597 504 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 TRIM9Q9C026 710 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 EFCC1Q9HA90 598 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 CYP26B1Q9NR63 512 aa9.77□□□□□ -0.84
SPTBN1-207ENST00000615901 ESYT2A0FGR8 921 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 FAM170AA1A519 330 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 PDXDC1Q6P996 788 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 DAGLBQ8NCG7 672 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 VIRMAQ69YN4 1812 aaKnown RBP9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 CASZ1Q86V15 1759 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 HGSO14964 777 aaPredicted RBP9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 MT-ND3P03897 115 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 CHRNA3P32297 505 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 BEST2Q8NFU1 509 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.77□□□□□ -0.854e-12■■■□□ 15.8
SPTBN1-207ENST00000615901 RAVER2Q9HCJ3 691 aaKnown RBP9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 SLC9A2Q9UBY0 812 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 CAPN11Q9UMQ6 739 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 SLC16A4O15374 487 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 DPYDQ12882 1025 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 WNT8AQ9H1J5 351 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 POC1B-GALNT4F8VUJ3 575 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 FOXP2O15409 715 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 DYNLT1P63172 113 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 DBN1Q16643 649 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 EDRF1Q3B7T1 1238 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 TBC1D10BQ4KMP7 808 aaPredicted RBP9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 CYP4F22Q6NT55 531 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 FBXO33Q7Z6M2 555 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 PCDHA10Q9Y5I2 948 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 SHPRHQ149N8 1683 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 RGL2O15211 777 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 KCNQ2O43526 872 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 CDC42EP1Q00587 391 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 STK38LQ9Y2H1 464 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 CTNND1O60716 968 aaKnown RBP9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 SNX1Q13596 522 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 TMEM270Q6UE05 265 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 EEPD1Q7L9B9 569 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 CCNYQ8ND76 341 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 RNF139Q8WU17 664 aa9.77□□□□□ -0.85
SPTBN1-207ENST00000615901 GOLGA8IPA6NC78 632 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 GOLGA8JA6NMD2 632 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 FCER1AP12319 257 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 Q3C1V9 767 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 SLITRK6Q9H5Y7 841 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 IQCA1LA6NCM1 817 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 C19orf81C9J6K1 198 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 KRT7P08729 469 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 MARK3P27448 753 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 GCLMP48507 274 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 GABBR1Q9UBS5 961 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 IP6K2Q9UHH9 426 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 ANAPC7Q9UJX3 599 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 KRT37O76014 449 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 PNMA6AP0CW24 399 aaPredicted RBP9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 MMP14P50281 582 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 PPP2R5CQ13362 524 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 TFDP2Q14188 446 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 FBXO38Q6PIJ6 1188 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 DNAAF3Q8N9W5 541 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 ZNF564Q8TBZ8 553 aaPredicted RBP9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 TNS2Q63HR2 1409 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 PLS3P13797 630 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 STAT3P40763 770 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 GFPT1Q06210 699 aaPredicted RBP9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 EPHA7Q15375 998 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 CNOT8Q9UFF9 292 aaKnown RBP9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 TDP2O95551 362 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 PTPN21Q16825 1174 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 SDCCAG3Q96C92 435 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 RPAP3Q9H6T3 665 aaPredicted RBP9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 CNTNAP5Q8WYK1 1306 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 STX1BP61266 288 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 ATG16L1Q676U5 607 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 GBP7Q8N8V2 638 aaPredicted RBP9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 FBXL13Q8NEE6 735 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 HDAC11Q96DB2 347 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 OSBPL9Q96SU4 736 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 FAM49AQ9H0Q0 323 aaPredicted RBP9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 EPS15L1Q9UBC2 864 aa9.76□□□□□ -0.85
SPTBN1-207ENST00000615901 MYL3P08590 195 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms