RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 ARID2Q68CP9 1835 aa20.89■□□□□ 0.94
MMP28-204ENST00000615136 ALDH5A1P51649 535 aaPredicted RBP20.89■□□□□ 0.93
MMP28-204ENST00000615136 IRX3P78415 501 aaPredicted RBP20.89■□□□□ 0.93
MMP28-204ENST00000615136 EAPPQ56P03 285 aaPredicted RBP20.89■□□□□ 0.93
MMP28-204ENST00000615136 ABHD15Q6UXT9 468 aa20.89■□□□□ 0.93
MMP28-204ENST00000615136 ZNF771Q7L3S4 317 aaPredicted RBP20.89■□□□□ 0.93
MMP28-204ENST00000615136 HAUS6Q7Z4H7 955 aa20.89■□□□□ 0.93
MMP28-204ENST00000615136 RDH13Q8NBN7 331 aa20.89■□□□□ 0.93
MMP28-204ENST00000615136 BSNDQ8WZ55 320 aa20.89■□□□□ 0.93
MMP28-204ENST00000615136 PCIF1Q9H4Z3 704 aa20.89■□□□□ 0.93
MMP28-204ENST00000615136 ABCB6Q9NP58 842 aa20.89■□□□□ 0.93
MMP28-204ENST00000615136 SIX2Q9NPC8 291 aa20.89■□□□□ 0.93
MMP28-204ENST00000615136 L1RE1Q9UN81 338 aa20.89■□□□□ 0.93
MMP28-204ENST00000615136 NFASCO94856 1347 aa20.89■□□□□ 0.93
MMP28-204ENST00000615136 PJA2O43164 708 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 AKR1B10O60218 316 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 SRGAP2O75044 1071 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 TRIM49P0CI25 452 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 TRIM49CP0CI26 452 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 OAS2P29728 719 aaKnown RBP20.88■□□□□ 0.93
MMP28-204ENST00000615136 ARID5AQ03989 594 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 GFPT1Q06210 699 aaPredicted RBP20.88■□□□□ 0.93
MMP28-204ENST00000615136 STXBP2Q15833 593 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 EXOC3L4Q17RC7 722 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 SFMBT2Q5VUG0 894 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 GJB7Q6PEY0 223 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 SEPT14Q6ZU15 432 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 CYFIP1Q7L576 1253 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 JRKLQ9Y4A0 524 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 RBAK-RBAKDNI3L0D1 243 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 SOCS7O14512 581 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 TACC1O75410 805 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 GJA5P36382 358 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 RAPGEF1Q13905 1077 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 GNPTABQ3T906 1256 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 KLHDC7AQ5VTJ3 777 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 HDXQ7Z353 690 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 FAM133AQ8N9E0 248 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 DNERQ8NFT8 737 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 OPTNQ96CV9 577 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 CEP170P1Q96L14 293 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 IWS1Q96ST2 819 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 CBWD1Q9BRT8 395 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 KCNH4Q9UQ05 1017 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 CAPN6Q9Y6Q1 641 aa20.88■□□□□ 0.93
MMP28-204ENST00000615136 CXCL11O14625 94 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 STAM2O75886 525 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 PSAPP07602 524 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 MAPTP10636 758 aaKnown RBP20.87■□□□□ 0.93
MMP28-204ENST00000615136 UCHL3P15374 230 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 ENOX2Q16206 610 aaKnown RBP20.87■□□□□ 0.93
MMP28-204ENST00000615136 Q3C1V9 767 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 TDRD12Q587J7 1177 aaKnown RBP20.87■□□□□ 0.93
MMP28-204ENST00000615136 DRC1Q96MC2 740 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 MKNK1Q9BUB5 465 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 PLCB1Q9NQ66 1216 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 PFASO15067 1338 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 EIF3JO75822 258 aaKnown RBP20.87■□□□□ 0.93
MMP28-204ENST00000615136 POTEJP0CG39 1038 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 NF2P35240 595 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 NCKAP1LP55160 1127 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 GTF2BQ00403 316 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 PRKCEQ02156 737 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 CBWD6Q4V339 395 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 CBWD3Q5JTY5 395 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 CBWD5Q5RIA9 395 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 ZC3H15Q8WU90 426 aaKnown RBP20.87■□□□□ 0.93
MMP28-204ENST00000615136 CDHR1Q96JP9 859 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 GCNT4Q9P109 453 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 RBPJLQ9UBG7 517 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 SNX12Q9UMY4 172 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 AGTPBP1Q9UPW5 1226 aa20.87■□□□□ 0.93
MMP28-204ENST00000615136 TARSL2A2RTX5 802 aaKnown RBP20.86■□□□□ 0.93
MMP28-204ENST00000615136 EXOC3O60645 756 aa20.86■□□□□ 0.93
MMP28-204ENST00000615136 ATP4AP20648 1035 aa20.86■□□□□ 0.93
MMP28-204ENST00000615136 DLG4P78352 724 aa20.86■□□□□ 0.93
MMP28-204ENST00000615136 PPIL2Q13356 520 aa20.86■□□□□ 0.93
MMP28-204ENST00000615136 TXLNBQ8N3L3 684 aa20.86■□□□□ 0.93
MMP28-204ENST00000615136 ATP6V0A1Q93050 837 aa20.86■□□□□ 0.93
MMP28-204ENST00000615136 TAF1DQ9H5J8 278 aaPredicted RBP20.86■□□□□ 0.93
MMP28-204ENST00000615136 XPNPEP1Q9NQW7 623 aa20.86■□□□□ 0.93
MMP28-204ENST00000615136 MYH10P35580 1976 aa20.86■□□□□ 0.93
MMP28-204ENST00000615136 SYNGAP1Q96PV0 1343 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 PGK2P07205 417 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 PRLRP16471 622 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 ICAM3P32942 547 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 NPTX2P47972 431 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 GBP6Q6ZN66 633 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 EEPD1Q7L9B9 569 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 ZNF572Q7Z3I7 529 aaPredicted RBP20.85■□□□□ 0.93
MMP28-204ENST00000615136 SLC9A9Q8IVB4 645 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 CAPZA3Q96KX2 299 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 ACCSQ96QU6 501 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 MLXIPQ9HAP2 919 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 FBXO40Q9UH90 709 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 SEPT9Q9UHD8 586 aaPredicted RBP20.85■□□□□ 0.93
MMP28-204ENST00000615136 ZHX1Q9UKY1 873 aaPredicted RBP20.85■□□□□ 0.93
MMP28-204ENST00000615136 FRMD4BQ9Y2L6 1034 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 GLTPD2A6NH11 291 aa20.85■□□□□ 0.93
MMP28-204ENST00000615136 CCDC169A6NNP5 214 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms