RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 IFNB1P01574 187 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 TAL1P17542 331 aaPredicted RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 SNRNP48Q6IEG0 339 aaKnown RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 ZNF662Q6ZS27 426 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 NSRP1Q9H0G5 558 aaKnown RBP6.89□□□□□ -1.31
SNX13-213ENST00000611725 CARD9Q9H257 536 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 HOMER3Q9NSC5 361 aa6.89□□□□□ -1.31
SNX13-213ENST00000611725 NOP56O00567 594 aaKnown RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 SLITRK3O94933 977 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 FTLP02792 175 aaPredicted RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 PON1P27169 355 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 GPC5P78333 572 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 IRX3P78415 501 aaPredicted RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 KCNA1Q09470 495 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 GKAP1Q5VSY0 366 aaPredicted RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 TATDN1Q6P1N9 297 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 RUBCNQ92622 972 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 KDM3BQ7LBC6 1761 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 RGPD8O14715 1765 aaPredicted RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 PLIN4Q96Q06 1357 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 KLRG2A4D1S0 409 aaPredicted RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 HMGB1P1B2RPK0 211 aaPredicted RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 BUB1BO60566 1050 aaPredicted RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 CYP3A4P08684 503 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 NF2P35240 595 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 LIG3P49916 1009 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 CASP5P51878 434 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 RWDD2BP57060 319 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 BTNL9Q6UXG8 535 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 ANKS4BQ8N8V4 417 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 SAAL1Q96ER3 474 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 NKIRAS1Q9NYS0 192 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 DAPK3O43293 454 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 SORBS3O60504 671 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 MTERF2Q49AM1 385 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 GJB7Q6PEY0 223 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 AGBL3Q8NEM8 1001 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 FAM81BQ96LP2 452 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 NRBP2Q9NSY0 501 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 SEPT9Q9UHD8 586 aaPredicted RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 ATF5Q9Y2D1 282 aaPredicted RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 PCDHGC5Q9Y5F6 944 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 PFASO15067 1338 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 LTN1O94822 1766 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 CYP3A7-CYP3A51PA0A087WV96 503 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 KRT14P02533 472 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 CYP3A7P24462 503 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 CXCL9Q07325 125 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 BAATQ14032 418 aaPredicted RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 ETNPPLQ8TBG4 499 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 KCNK9Q9NPC2 374 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 HSPBP1Q9NZL4 362 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 CNOT8Q9UFF9 292 aaKnown RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 ECEL1O95672 775 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 MUTP22033 750 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 KSR1Q8IVT5 923 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 SH2D3CQ8N5H7 860 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 FGFBP2Q9BYJ0 223 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 GABBR1Q9UBS5 961 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 NOVA2Q9UNW9 492 aaKnown RBP6.88□□□□□ -1.31
SNX13-213ENST00000611725 PLAAQ9Y263 795 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 CRYBG1Q9Y4K1 1723 aa6.88□□□□□ -1.31
SNX13-213ENST00000611725 K7ERI5 159 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 FOXN3O00409 490 aaPredicted RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 ZBTB22O15209 634 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 P4HA2O15460 535 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 RAD51CO43502 376 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 DGAT1O75907 488 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 PSAPP07602 524 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 VIMP08670 466 aaKnown RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 SPATA31C1P0DKV0 1188 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 PRKCIP41743 596 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 EN1Q05925 392 aaPredicted RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 KCNMA1Q12791 1236 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 ECM1Q16610 540 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 BRDTQ58F21 947 aaPredicted RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 HYIQ5T013 277 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 OTOP1Q7RTM1 612 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 DDX42Q86XP3 938 aaKnown RBP eCLIP6.87□□□□□ -1.31
SNX13-213ENST00000611725 WRNIP1Q96S55 665 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 PDCD2LQ9BRP1 358 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 ANKFY1Q9P2R3 1169 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 SYNPO2Q9UMS6 1093 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 ALG6Q9Y672 507 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 SYNGAP1Q96PV0 1343 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 MAPK4P31152 587 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 ADCY8P40145 1251 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 HMGCS2P54868 508 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 EIF3BP55884 814 aaKnown RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 DALRD3Q5D0E6 543 aaKnown RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 HGSNATQ68CP4 663 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 SPATS2Q86XZ4 545 aaKnown RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 TRIM11Q96F44 468 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 AGPAT1Q99943 283 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 TEX13BQ9BXU2 312 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 SCAF8Q9UPN6 1271 aaKnown RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 A0A087WUV0 522 aaPredicted RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 PPP1R37O75864 691 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 GLI1P08151 1106 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms