RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 PRPF31Q8WWY3 499 aaKnown RBP9.68□□□□□ -0.86
SNCA-212ENST00000611107 FOXD4L4Q8WXT5 416 aaPredicted RBP9.68□□□□□ -0.86
SNCA-212ENST00000611107 CLP1Q92989 425 aaKnown RBP9.68□□□□□ -0.86
SNCA-212ENST00000611107 CEP170P1Q96L14 293 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 CWH43Q9H720 699 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 GPRC5CQ9NQ84 441 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 PCDHA12Q9UN75 941 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 USP20Q9Y2K6 914 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 ZDHHC9Q9Y397 364 aa9.68□□□□□ -0.86
SNCA-212ENST00000611107 PDCD11Q14690 1871 aaKnown RBP9.68□□□□□ -0.86
SNCA-212ENST00000611107 MUC3AQ02505 3323 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 TTLL13PA6NNM8 815 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 H3BNC9 293 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 DLL1O00548 723 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 BRD1O95696 1058 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 EDN1P05305 212 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 ITGB1P05556 798 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 EIF4BP23588 611 aaKnown RBP9.67□□□□□ -0.86
SNCA-212ENST00000611107 CTNNB1P35222 781 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 IRS1P35568 1242 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 BMPR1AP36894 532 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 TECP42680 631 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 AFF1P51825 1210 aaKnown RBP9.67□□□□□ -0.86
SNCA-212ENST00000611107 GPM6BQ13491 265 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 EMC2Q15006 297 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 XKR9Q5GH70 373 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 UBXN11Q5T124 520 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 POTEGQ6S5H5 508 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 KCNK18Q7Z418 384 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 ECHDC2Q86YB7 292 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 FIBCD1Q8N539 461 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 LRRC15Q8TF66 581 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 NLRP7Q8WX94 980 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 BSNDQ8WZ55 320 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 TNPO1Q92973 898 aaKnown RBP9.67□□□□□ -0.86
SNCA-212ENST00000611107 LPPQ93052 612 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 NLRP4Q96MN2 994 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 CASD1Q96PB1 797 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 MAP7D2Q96T17 732 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 MMTAG2Q9BU76 263 aaKnown RBP9.67□□□□□ -0.86
SNCA-212ENST00000611107 ZSCAN16Q9H4T2 348 aaPredicted RBP9.67□□□□□ -0.86
SNCA-212ENST00000611107 ALG13Q9NP73 1137 aaKnown RBP9.67□□□□□ -0.86
SNCA-212ENST00000611107 CEP131Q9UPN4 1083 aa9.67□□□□□ -0.86
SNCA-212ENST00000611107 CITO14578 2027 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 TBKBP1A7MCY6 615 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 C5orf67F2Z3F1 127 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 LAD1O00515 517 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 GPR182O15218 404 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 MARCH6O60337 910 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 LYPLA2O95372 231 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 BAG4O95429 457 aaKnown RBP9.66□□□□□ -0.86
SNCA-212ENST00000611107 SRGAP2CP0DJJ0 459 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 HOXA11P31270 313 aaPredicted RBP9.66□□□□□ -0.86
SNCA-212ENST00000611107 PRPHP41219 470 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 RARRES1P49788 294 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNCA-212ENST00000611107 RBM10P98175 930 aaKnown RBP9.66□□□□□ -0.86
SNCA-212ENST00000611107 GRIN1Q05586 938 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 LAMTOR4Q0VGL1 99 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 BTG3Q14201 252 aaPredicted RBP9.66□□□□□ -0.86
SNCA-212ENST00000611107 PTPAQ15257 358 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 SF3A1Q15459 793 aaKnown RBP9.66□□□□□ -0.86
SNCA-212ENST00000611107 TCEAL5Q5H9L2 206 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 ADGRD2Q7Z7M1 963 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 KLHL23Q8NBE8 558 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 FEZF2Q8TBJ5 459 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 USP28Q96RU2 1077 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 FTHL17Q9BXU8 183 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 ZSWIM4Q9H7M6 989 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 TYW1Q9NV66 732 aaKnown RBP9.66□□□□□ -0.86
SNCA-212ENST00000611107 CLIC4Q9Y696 253 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 ANK1P16157 1881 aa9.66□□□□□ -0.86
SNCA-212ENST00000611107 TDRD15B5MCY1 1934 aaKnown RBP9.65□□□□□ -0.86
SNCA-212ENST00000611107 DENND3A2RUS2 1198 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 LINC01565O15544 149 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 B4GALT5O43286 388 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 USO1O60763 962 aaKnown RBP9.65□□□□□ -0.86
SNCA-212ENST00000611107 BMP1P13497 986 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 PDIA4P13667 645 aaKnown RBP9.65□□□□□ -0.86
SNCA-212ENST00000611107 GLRA2P23416 452 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 TMOD1P28289 359 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 ARL2P36404 184 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 NASPP49321 788 aaPredicted RBP9.65□□□□□ -0.86
SNCA-212ENST00000611107 DLX2Q07687 328 aaPredicted RBP9.65□□□□□ -0.86
SNCA-212ENST00000611107 CAPSQ13938 189 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 AMHR2Q16671 573 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 SLC24A5Q71RS6 500 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 MAEAQ7L5Y9 396 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 CDR2LQ86X02 465 aaPredicted RBP9.65□□□□□ -0.86
SNCA-212ENST00000611107 CMTR2Q8IYT2 770 aaKnown RBP9.65□□□□□ -0.86
SNCA-212ENST00000611107 IGSF22Q8N9C0 903 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 SPPL3Q8TCT6 385 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 BCL7CQ8WUZ0 217 aaPredicted RBP9.65□□□□□ -0.86
SNCA-212ENST00000611107 MRPL38Q96DV4 380 aaKnown RBP9.65□□□□□ -0.86
SNCA-212ENST00000611107 CHAMP1Q96JM3 812 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 CXCL16Q9H2A7 254 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 PLAGL2Q9UPG8 496 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 RBM19Q9Y4C8 960 aaKnown RBP9.65□□□□□ -0.86
SNCA-212ENST00000611107 PCDHB7Q9Y5E2 793 aa9.65□□□□□ -0.86
SNCA-212ENST00000611107 COL4A3BPQ9Y5P4 624 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms