RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 KRT13P13646 458 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 LMNB1P20700 586 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 NPEPPSP55786 919 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 MYL7Q01449 175 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 SH3D19Q5HYK7 790 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 IWS1Q96ST2 819 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 PACSIN1Q9BY11 444 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 GPRC5CQ9NQ84 441 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 DAAM1Q9Y4D1 1078 aa30.58■■■□□ 2.49
CSPG5-205ENST00000610462 LCTP09848 1927 aa30.57■■■□□ 2.48
CSPG5-205ENST00000610462 PEX3P56589 373 aa30.57■■■□□ 2.48
CSPG5-205ENST00000610462 BEND6Q5SZJ8 279 aaPredicted RBP30.57■■■□□ 2.48
CSPG5-205ENST00000610462 RDH13Q8NBN7 331 aa30.57■■■□□ 2.48
CSPG5-205ENST00000610462 TLR10Q9BXR5 811 aa30.57■■■□□ 2.48
CSPG5-205ENST00000610462 INTS2Q9H0H0 1204 aaKnown RBP30.57■■■□□ 2.48
CSPG5-205ENST00000610462 USP2O75604 605 aaPredicted RBP30.56■■■□□ 2.48
CSPG5-205ENST00000610462 RGS20O76081 388 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 FAM102BQ5T8I3 360 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 NFRKBQ6P4R8 1299 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 INTS8Q75QN2 995 aaKnown RBP30.56■■■□□ 2.48
CSPG5-205ENST00000610462 ANO5Q75V66 913 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 COG1Q8WTW3 980 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 STK33Q9BYT3 514 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 PCIF1Q9H4Z3 704 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 NAGPAQ9UK23 515 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 NFASCO94856 1347 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 SBF1O95248 1867 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 SLC16A4O15374 487 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 STAM2O75886 525 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 TRMT1LQ7Z2T5 733 aaKnown RBP30.56■■■□□ 2.48
CSPG5-205ENST00000610462 CDHR1Q96JP9 859 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 DNAJC12Q9UKB3 198 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 NENFQ9UMX5 172 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 PCDHGC5Q9Y5F6 944 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 ATP8B3O60423 1300 aa30.56■■■□□ 2.48
CSPG5-205ENST00000610462 TISP43B9A030 160 aa30.55■■■□□ 2.48
CSPG5-205ENST00000610462 DKC1O60832 514 aaKnown RBP eCLIP30.55■■■□□ 2.48
CSPG5-205ENST00000610462 ITIH3Q06033 890 aa30.55■■■□□ 2.48
CSPG5-205ENST00000610462 PRKG1Q13976 671 aa30.55■■■□□ 2.48
CSPG5-205ENST00000610462 OTUD6AQ7L8S5 288 aa30.55■■■□□ 2.48
CSPG5-205ENST00000610462 VPS36Q86VN1 386 aa30.55■■■□□ 2.48
CSPG5-205ENST00000610462 ABCB6Q9NP58 842 aa30.55■■■□□ 2.48
CSPG5-205ENST00000610462 GABBR1Q9UBS5 961 aa30.55■■■□□ 2.48
CSPG5-205ENST00000610462 PTPRFP10586 1907 aa30.55■■■□□ 2.48
CSPG5-205ENST00000610462 NCK2O43639 380 aa30.54■■■□□ 2.48
CSPG5-205ENST00000610462 PALMO75781 387 aa30.54■■■□□ 2.48
CSPG5-205ENST00000610462 SOX5P35711 763 aa30.54■■■□□ 2.48
CSPG5-205ENST00000610462 XXYLT1Q8NBI6 393 aa30.54■■■□□ 2.48
CSPG5-205ENST00000610462 CBWD1Q9BRT8 395 aa30.54■■■□□ 2.48
CSPG5-205ENST00000610462 TARSL2A2RTX5 802 aaKnown RBP30.54■■■□□ 2.48
CSPG5-205ENST00000610462 F8VZ95 297 aa30.54■■■□□ 2.48
CSPG5-205ENST00000610462 ALKBH5Q6P6C2 394 aaKnown RBP30.54■■■□□ 2.48
CSPG5-205ENST00000610462 ATP6V0A1Q93050 837 aa30.54■■■□□ 2.48
CSPG5-205ENST00000610462 HSPBP1Q9NZL4 362 aa30.54■■■□□ 2.48
CSPG5-205ENST00000610462 MAPK13O15264 365 aa30.53■■■□□ 2.48
CSPG5-205ENST00000610462 GFPT2O94808 682 aa30.53■■■□□ 2.48
CSPG5-205ENST00000610462 PSAPP07602 524 aa30.53■■■□□ 2.48
CSPG5-205ENST00000610462 APEX2Q9UBZ4 518 aa30.53■■■□□ 2.48
CSPG5-205ENST00000610462 MCM3P25205 808 aa30.53■■■□□ 2.48
CSPG5-205ENST00000610462 VAMP7P51809 220 aa30.53■■■□□ 2.48
CSPG5-205ENST00000610462 DRAP1Q14919 205 aaPredicted RBP30.53■■■□□ 2.48
CSPG5-205ENST00000610462 HVCN1Q96D96 273 aa30.53■■■□□ 2.48
CSPG5-205ENST00000610462 SNCAIPQ9Y6H5 919 aa30.53■■■□□ 2.48
CSPG5-205ENST00000610462 MAP2K7O14733 419 aa30.52■■■□□ 2.48
CSPG5-205ENST00000610462 ZNF862O60290 1169 aa30.52■■■□□ 2.48
CSPG5-205ENST00000610462 EVI5O60447 810 aa30.52■■■□□ 2.48
CSPG5-205ENST00000610462 STBD1O95210 358 aa30.52■■■□□ 2.48
CSPG5-205ENST00000610462 SMTNP53814 917 aa30.52■■■□□ 2.48
CSPG5-205ENST00000610462 C2orf54Q08AI8 447 aa30.52■■■□□ 2.48
CSPG5-205ENST00000610462 FMNL3Q8IVF7 1028 aa30.52■■■□□ 2.48
CSPG5-205ENST00000610462 JPH1Q9HDC5 661 aaPredicted RBP30.52■■■□□ 2.48
CSPG5-205ENST00000610462 EXOC7Q9UPT5 735 aa30.52■■■□□ 2.48
CSPG5-205ENST00000610462 SPATA31C2B4DYI2 1134 aa30.51■■■□□ 2.48
CSPG5-205ENST00000610462 N4BP1O75113 896 aaKnown RBP30.51■■■□□ 2.48
CSPG5-205ENST00000610462 GABPB1Q06547 395 aaPredicted RBP30.51■■■□□ 2.48
CSPG5-205ENST00000610462 GNPTABQ3T906 1256 aa30.51■■■□□ 2.48
CSPG5-205ENST00000610462 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.51■■■□□ 2.48
CSPG5-205ENST00000610462 MMGT1Q8N4V1 131 aa30.51■■■□□ 2.48
CSPG5-205ENST00000610462 SLC9A2Q9UBY0 812 aa30.51■■■□□ 2.48
CSPG5-205ENST00000610462 L1RE1Q9UN81 338 aa30.51■■■□□ 2.48
CSPG5-205ENST00000610462 EMSYQ7Z589 1322 aa30.51■■■□□ 2.47
CSPG5-205ENST00000610462 P4HA2O15460 535 aa30.51■■■□□ 2.47
CSPG5-205ENST00000610462 RFX1P22670 979 aa30.51■■■□□ 2.47
CSPG5-205ENST00000610462 DLG4P78352 724 aa30.51■■■□□ 2.47
CSPG5-205ENST00000610462 TMEM161BQ8NDZ6 487 aa30.51■■■□□ 2.47
CSPG5-205ENST00000610462 LMO3Q8TAP4 145 aa30.51■■■□□ 2.47
CSPG5-205ENST00000610462 KIFAP3Q92845 792 aa30.51■■■□□ 2.47
CSPG5-205ENST00000610462 CEP170P1Q96L14 293 aa30.51■■■□□ 2.47
CSPG5-205ENST00000610462 UBXN6Q9BZV1 441 aa30.51■■■□□ 2.47
CSPG5-205ENST00000610462 RNF216Q9NWF9 866 aaPredicted RBP30.51■■■□□ 2.47
CSPG5-205ENST00000610462 PAPPA2Q9BXP8 1791 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 CXCR5P32302 372 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 NPTX2P47972 431 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 VGLL4Q14135 290 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 SWSAP1Q6NVH7 229 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 HDXQ7Z353 690 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 CHST13Q8NET6 341 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 GPR88Q9GZN0 384 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 PRDM4Q9UKN5 801 aa30.5■■■□□ 2.47
CSPG5-205ENST00000610462 TBX20Q9UMR3 447 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms