RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 RHPN2Q8IUC4 686 aa17.96■□□□□ 0.47
SGMS1-209ENST00000609445 ABI1Q8IZP0 508 aa17.96■□□□□ 0.47
SGMS1-209ENST00000609445 ZNF579Q8NAF0 562 aaKnown RBP17.96■□□□□ 0.47
SGMS1-209ENST00000609445 VN1R2Q8NFZ6 395 aa17.96■□□□□ 0.47
SGMS1-209ENST00000609445 HAS1Q92839 578 aa17.96■□□□□ 0.47
SGMS1-209ENST00000609445 FAM20AQ96MK3 541 aa17.96■□□□□ 0.47
SGMS1-209ENST00000609445 WRAP73Q9P2S5 460 aaPredicted RBP17.96■□□□□ 0.47
SGMS1-209ENST00000609445 A0A0U1RQF3 1178 aa17.95■□□□□ 0.46
SGMS1-209ENST00000609445 FDPSP14324 419 aaKnown RBP17.95■□□□□ 0.46
SGMS1-209ENST00000609445 GCFC2P16383 781 aaKnown RBP17.95■□□□□ 0.46
SGMS1-209ENST00000609445 XBP1P17861 261 aa17.95■□□□□ 0.46
SGMS1-209ENST00000609445 QARSP47897 775 aaKnown RBP17.95■□□□□ 0.46
SGMS1-209ENST00000609445 DNM2P50570 870 aa17.95■□□□□ 0.46
SGMS1-209ENST00000609445 ANAPC15P60006 121 aa17.95■□□□□ 0.46
SGMS1-209ENST00000609445 NR5A1Q13285 461 aa17.95■□□□□ 0.46
SGMS1-209ENST00000609445 CSPP1Q1MSJ5 1256 aa17.95■□□□□ 0.46
SGMS1-209ENST00000609445 PPP4R3AQ6IN85 833 aa17.95■□□□□ 0.46
SGMS1-209ENST00000609445 LRRC43Q8N309 656 aa17.95■□□□□ 0.46
SGMS1-209ENST00000609445 SMRP1Q8NCR6 262 aa17.95■□□□□ 0.46
SGMS1-209ENST00000609445 MRPS27Q92552 414 aaKnown RBP17.95■□□□□ 0.46
SGMS1-209ENST00000609445 NLRP4Q96MN2 994 aa17.95■□□□□ 0.46
SGMS1-209ENST00000609445 ZNF558Q96NG5 402 aa17.95■□□□□ 0.46
SGMS1-209ENST00000609445 ARID2Q68CP9 1835 aa17.95■□□□□ 0.46
SGMS1-209ENST00000609445 DCXO43602 365 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 EYA4O95677 639 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 ALADP13716 330 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 FOSBP53539 338 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 PLCB3Q01970 1234 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 COASYQ13057 564 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 ANKRD1Q15327 319 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 ME3Q16798 604 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 DUSP6Q16828 381 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 LONRF3Q496Y0 759 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 ZNF410Q86VK4 478 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 CYP26B1Q9NR63 512 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 BMP2KQ9NSY1 1161 aaPredicted RBP17.94■□□□□ 0.46
SGMS1-209ENST00000609445 DACT1Q9NYF0 836 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 LZTS1Q9Y250 596 aa17.94■□□□□ 0.46
SGMS1-209ENST00000609445 MUC6Q6W4X9 2439 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 TRIOO75962 3097 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 MARCH6O60337 910 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 EOMESO95936 686 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 SFPQP23246 707 aaKnown RBP eCLIP17.93■□□□□ 0.46
SGMS1-209ENST00000609445 PHKA2P46019 1235 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 CDC42EP1Q00587 391 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 NCAPH2Q6IBW4 605 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 LPPQ93052 612 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 DYDC2Q96IM9 177 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 TCF25Q9BQ70 676 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 ENTPD7Q9NQZ7 604 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 CHST12Q9NRB3 414 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 RGL1Q9NZL6 768 aa17.93■□□□□ 0.46
SGMS1-209ENST00000609445 PIN4Q9Y237 131 aaKnown RBP17.93■□□□□ 0.46
SGMS1-209ENST00000609445 USP15Q9Y4E8 981 aaPredicted RBP17.93■□□□□ 0.46
SGMS1-209ENST00000609445 MEIS3P2A8K0S8 358 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 HIDE1A8MVS5 230 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 NT5C1B-RDH14C9J2C7 533 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 P4HBP07237 508 aaKnown RBP17.92■□□□□ 0.46
SGMS1-209ENST00000609445 KRT2P35908 639 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 PLA2G5P39877 138 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 EPHA7Q15375 998 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 TWF2Q6IBS0 349 aaKnown RBP17.92■□□□□ 0.46
SGMS1-209ENST00000609445 PDE12Q6L8Q7 609 aaKnown RBP17.92■□□□□ 0.46
SGMS1-209ENST00000609445 CATSPER4Q7RTX7 472 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 SLC39A11Q8N1S5 342 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 WASF1Q92558 559 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 TNFRSF25Q93038 417 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 GTF3C6Q969F1 213 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 TMEM143Q96AN5 459 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 CEP170P1Q96L14 293 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 POP1Q99575 1024 aaKnown RBP17.92■□□□□ 0.46
SGMS1-209ENST00000609445 JPH2Q9BR39 696 aaPredicted RBP17.92■□□□□ 0.46
SGMS1-209ENST00000609445 LXNQ9BS40 222 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 SPG21Q9NZD8 308 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 PUF60Q9UHX1 559 aaKnown RBP17.92■□□□□ 0.46
SGMS1-209ENST00000609445 MUTYHQ9UIF7 546 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 HCN4Q9Y3Q4 1203 aa17.92■□□□□ 0.46
SGMS1-209ENST00000609445 PRR33A8MZF0 331 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 ZBTB39O15060 712 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 TBX3O15119 743 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 JAK2O60674 1132 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 PPM1AP35813 382 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 POLGP54098 1239 aaPredicted RBP17.91■□□□□ 0.46
SGMS1-209ENST00000609445 CYP4A11Q02928 519 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 SPIRE1Q08AE8 756 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 CTTNQ14247 550 aaKnown RBP17.91■□□□□ 0.46
SGMS1-209ENST00000609445 LLGL2Q6P1M3 1020 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 RNF135Q8IUD6 432 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 NSUN7Q8NE18 718 aaKnown RBP17.91■□□□□ 0.46
SGMS1-209ENST00000609445 PRPF31Q8WWY3 499 aaKnown RBP17.91■□□□□ 0.46
SGMS1-209ENST00000609445 FAM122AQ96E09 287 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 CDCA3Q99618 268 aaPredicted RBP17.91■□□□□ 0.46
SGMS1-209ENST00000609445 NAP1L4Q99733 375 aaKnown RBP17.91■□□□□ 0.46
SGMS1-209ENST00000609445 INO80BQ9C086 356 aaPredicted RBP17.91■□□□□ 0.46
SGMS1-209ENST00000609445 DHX33Q9H6R0 707 aaKnown RBP17.91■□□□□ 0.46
SGMS1-209ENST00000609445 IFT122Q9HBG6 1241 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 COL4A3BPQ9Y5P4 624 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 TECTAO75443 2155 aa17.91■□□□□ 0.46
SGMS1-209ENST00000609445 WNT7AO00755 349 aa17.9■□□□□ 0.46
SGMS1-209ENST00000609445 DKC1O60832 514 aaKnown RBP eCLIP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms