RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 PP2D1A8MPX8 630 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 LAD1O00515 517 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 GAS2O43903 313 aaKnown RBP16.04■□□□□ 0.16
TUBE1-208ENST00000604743 LPXNO60711 386 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 XRCC6P12956 609 aaKnown RBP eCLIP16.04■□□□□ 0.16
TUBE1-208ENST00000604743 PDCP20941 246 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 CDC25AP30304 524 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 PDIA5Q14554 519 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 IL17AQ16552 155 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 CRIPAKQ8N1N5 446 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 RNF149Q8NC42 400 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 SNX29Q8TEQ0 813 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 SAMD11Q96NU1 681 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 IFT122Q9HBG6 1241 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 PRDM6Q9NQX0 595 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 PIN4Q9Y237 131 aaKnown RBP16.04■□□□□ 0.16
TUBE1-208ENST00000604743 COL4A6Q14031 1691 aa16.04■□□□□ 0.16
TUBE1-208ENST00000604743 ASAP2O43150 1006 aa16.03■□□□□ 0.16
TUBE1-208ENST00000604743 FGFR1P11362 822 aa16.03■□□□□ 0.16
TUBE1-208ENST00000604743 ATP2C1P98194 919 aaPredicted RBP16.03■□□□□ 0.16
TUBE1-208ENST00000604743 GPM6BQ13491 265 aa16.03■□□□□ 0.16
TUBE1-208ENST00000604743 SKIV2LQ15477 1246 aaKnown RBP16.03■□□□□ 0.16
TUBE1-208ENST00000604743 ZRSR1Q15695 479 aaKnown RBP16.03■□□□□ 0.16
TUBE1-208ENST00000604743 ECM1Q16610 540 aa16.03■□□□□ 0.16
TUBE1-208ENST00000604743 SPOUT1Q5T280 376 aaKnown RBP16.03■□□□□ 0.16
TUBE1-208ENST00000604743 KRT79Q5XKE5 535 aa16.03■□□□□ 0.16
TUBE1-208ENST00000604743 FAM43BQ6ZT52 329 aaPredicted RBP16.03■□□□□ 0.16
TUBE1-208ENST00000604743 CMTR2Q8IYT2 770 aaKnown RBP16.03■□□□□ 0.16
TUBE1-208ENST00000604743 ASAP3Q8TDY4 903 aa16.03■□□□□ 0.16
TUBE1-208ENST00000604743 POLR3FQ9H1D9 316 aaPredicted RBP16.03■□□□□ 0.16
TUBE1-208ENST00000604743 RNF216Q9NWF9 866 aaPredicted RBP16.03■□□□□ 0.16
TUBE1-208ENST00000604743 TMEM161AQ9NX61 479 aa16.03■□□□□ 0.16
TUBE1-208ENST00000604743 KIAA1024Q9UPX6 916 aa16.03■□□□□ 0.16
TUBE1-208ENST00000604743 MRPL42Q9Y6G3 142 aaKnown RBP16.03■□□□□ 0.16
TUBE1-208ENST00000604743 MYO7AQ13402 2215 aa16.03■□□□□ 0.16
TUBE1-208ENST00000604743 ARHGEF35A5YM69 484 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 VWA3AA6NCI4 1184 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 CSPG5O95196 566 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 SYT1P21579 422 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 BMPR1AP36894 532 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 PRPHP41219 470 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 FAM189BP81408 668 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 MXD4Q14582 209 aaPredicted RBP16.02■□□□□ 0.16
TUBE1-208ENST00000604743 LONRF3Q496Y0 759 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 TWF2Q6IBS0 349 aaKnown RBP16.02■□□□□ 0.16
TUBE1-208ENST00000604743 BRAPQ7Z569 592 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 SRGAP1Q7Z6B7 1085 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 ECHDC2Q86YB7 292 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 HSCBQ8IWL3 235 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.02■□□□□ 0.16
TUBE1-208ENST00000604743 IGSF22Q8N9C0 903 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 INTS4Q96HW7 963 aaKnown RBP16.02■□□□□ 0.16
TUBE1-208ENST00000604743 MINDY3Q9H8M7 445 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 GPRC5CQ9NQ84 441 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 DDX19AQ9NUU7 478 aaKnown RBP16.02■□□□□ 0.16
TUBE1-208ENST00000604743 DACT1Q9NYF0 836 aa16.02■□□□□ 0.16
TUBE1-208ENST00000604743 DBR1Q9UK59 544 aaKnown RBP16.02■□□□□ 0.16
TUBE1-208ENST00000604743 REV3LO60673 3130 aa16.02■□□□□ 0.15
TUBE1-208ENST00000604743 H3BNC9 293 aa16.01■□□□□ 0.15
TUBE1-208ENST00000604743 INO80B-WBP1J3KQ70 363 aa16.01■□□□□ 0.15
TUBE1-208ENST00000604743 POU3F3P20264 500 aaPredicted RBP16.01■□□□□ 0.15
TUBE1-208ENST00000604743 ARL2P36404 184 aa16.01■□□□□ 0.15
TUBE1-208ENST00000604743 PHKA2P46019 1235 aa16.01■□□□□ 0.15
TUBE1-208ENST00000604743 TFDP1Q14186 410 aa16.01■□□□□ 0.15
TUBE1-208ENST00000604743 PADI6Q6TGC4 694 aa16.01■□□□□ 0.15
TUBE1-208ENST00000604743 SNX21Q969T3 373 aa16.01■□□□□ 0.15
TUBE1-208ENST00000604743 ELAC1Q9H777 363 aaKnown RBP16.01■□□□□ 0.15
TUBE1-208ENST00000604743 POLD4Q9HCU8 107 aa16.01■□□□□ 0.15
TUBE1-208ENST00000604743 CHST12Q9NRB3 414 aa16.01■□□□□ 0.15
TUBE1-208ENST00000604743 RWDD3Q9Y3V2 267 aa16.01■□□□□ 0.15
TUBE1-208ENST00000604743 STK24Q9Y6E0 443 aa16.01■□□□□ 0.15
TUBE1-208ENST00000604743 A0A0U1RQF3 1178 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 E9PMD0 336 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 ERLIN2O94905 339 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 HSP90AA1P07900 732 aaKnown RBP16■□□□□ 0.15
TUBE1-208ENST00000604743 LINC00271P0C7V0 271 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 MUTP22033 750 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 GLRA2P23416 452 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 CAPSQ13938 189 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 SF3A1Q15459 793 aaKnown RBP16■□□□□ 0.15
TUBE1-208ENST00000604743 ABI1Q8IZP0 508 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 MCPH1Q8NEM0 835 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 CLP1Q92989 425 aaKnown RBP16■□□□□ 0.15
TUBE1-208ENST00000604743 PLIN2Q99541 437 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 BHMT2Q9H2M3 363 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 HCSTQ9UBK5 93 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 ATG2AQ2TAZ0 1938 aa16■□□□□ 0.15
TUBE1-208ENST00000604743 MYH11P35749 1972 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 LRRIQ4A6NIV6 560 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 HOXA2O43364 376 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 RB1P06400 928 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 PTENP60484 403 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 PTPROQ16827 1216 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 FAM173BQ6P4H8 233 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 SPRYD3Q8NCJ5 442 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 HELQQ8TDG4 1101 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 LPPQ93052 612 aa15.99■□□□□ 0.15
TUBE1-208ENST00000604743 MMTAG2Q9BU76 263 aaKnown RBP15.99■□□□□ 0.15
TUBE1-208ENST00000604743 ALG13Q9NP73 1137 aaKnown RBP15.99■□□□□ 0.15
TUBE1-208ENST00000604743 AGPAT5Q9NUQ2 364 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms