RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 NAMPTP43490 491 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 NFIL3Q16649 462 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 ZC3H3Q8IXZ2 948 aaKnown RBP19.78■□□□□ 0.76
VRK3-225ENST00000601912 RETREG2Q8NC44 543 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 TUBGCP2Q9BSJ2 902 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 VPS16Q9H269 839 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 SUGCTQ9HAC7 445 aa19.78■□□□□ 0.76
VRK3-225ENST00000601912 RTN4Q9NQC3 1192 aaKnown RBP19.78■□□□□ 0.76
VRK3-225ENST00000601912 CGNQ9P2M7 1197 aaKnown RBP19.78■□□□□ 0.76
VRK3-225ENST00000601912 IGKV6-21A0A0C4DH24 114 aa19.77■□□□□ 0.76
VRK3-225ENST00000601912 DENND3A2RUS2 1198 aa19.77■□□□□ 0.76
VRK3-225ENST00000601912 MAGEB2O15479 319 aa19.77■□□□□ 0.76
VRK3-225ENST00000601912 TGFB1I1O43294 461 aa19.77■□□□□ 0.76
VRK3-225ENST00000601912 NR3C1P04150 777 aa19.77■□□□□ 0.76
VRK3-225ENST00000601912 PRKCSHP14314 528 aaPredicted RBP19.77■□□□□ 0.76
VRK3-225ENST00000601912 CNGA1P29973 690 aa19.77■□□□□ 0.76
VRK3-225ENST00000601912 DNM2P50570 870 aa19.77■□□□□ 0.76
VRK3-225ENST00000601912 SNRPFP62306 86 aaKnown RBP19.77■□□□□ 0.76
VRK3-225ENST00000601912 CAP1Q01518 475 aa19.77■□□□□ 0.76
VRK3-225ENST00000601912 CCDC40Q4G0X9 1142 aa19.77■□□□□ 0.76
VRK3-225ENST00000601912 TRPV1Q8NER1 839 aa19.77■□□□□ 0.76
VRK3-225ENST00000601912 LENG1Q96BZ8 264 aaPredicted RBP19.77■□□□□ 0.76
VRK3-225ENST00000601912 IMPACTQ9P2X3 320 aa19.77■□□□□ 0.76
VRK3-225ENST00000601912 TBX20Q9UMR3 447 aa19.77■□□□□ 0.76
VRK3-225ENST00000601912 ZMYM2Q9UBW7 1377 aa19.76■□□□□ 0.75
VRK3-225ENST00000601912 THSD7BQ9C0I4 1608 aa19.76■□□□□ 0.75
VRK3-225ENST00000601912 GLRA2P23416 452 aa19.76■□□□□ 0.75
VRK3-225ENST00000601912 MXD4Q14582 209 aaPredicted RBP19.76■□□□□ 0.75
VRK3-225ENST00000601912 HS1BP3Q53T59 392 aa19.76■□□□□ 0.75
VRK3-225ENST00000601912 TMC6Q7Z403 805 aa19.76■□□□□ 0.75
VRK3-225ENST00000601912 VSTM4Q8IW00 320 aa19.76■□□□□ 0.75
VRK3-225ENST00000601912 DEPTORQ8TB45 409 aa19.76■□□□□ 0.75
VRK3-225ENST00000601912 RAET1EQ8TD07 263 aa19.76■□□□□ 0.75
VRK3-225ENST00000601912 ASAP3Q8TDY4 903 aa19.76■□□□□ 0.75
VRK3-225ENST00000601912 PSPC1Q8WXF1 523 aaKnown RBP19.76■□□□□ 0.75
VRK3-225ENST00000601912 KIFC3Q9BVG8 833 aa19.76■□□□□ 0.75
VRK3-225ENST00000601912 INTS13Q9NVM9 706 aa19.76■□□□□ 0.75
VRK3-225ENST00000601912 PES1O00541 588 aaKnown RBP19.75■□□□□ 0.75
VRK3-225ENST00000601912 SEPT4O43236 478 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 IGBP1P78318 339 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 CACNB2Q08289 660 aaPredicted RBP19.75■□□□□ 0.75
VRK3-225ENST00000601912 FSCN1Q16658 493 aaKnown RBP19.75■□□□□ 0.75
VRK3-225ENST00000601912 TRAPPC12Q8WVT3 735 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 PRPF31Q8WWY3 499 aaKnown RBP19.75■□□□□ 0.75
VRK3-225ENST00000601912 BEGAINQ9BUH8 593 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 NOC4LQ9BVI4 516 aaKnown RBP19.75■□□□□ 0.75
VRK3-225ENST00000601912 SPC25Q9HBM1 224 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 AGPAT3Q9NRZ7 376 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 ARHGAP28Q9P2N2 729 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 LRRIQ4A6NIV6 560 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 CLIC2O15247 247 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 ADCY3O60266 1144 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 PPFIA1Q13136 1202 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 MYBPC2Q14324 1141 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 EFCAB12Q6NXP0 572 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 MAP4K3Q8IVH8 894 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 LRRC71Q8N4P6 559 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 METTL13Q8N6R0 699 aa19.75■□□□□ 0.75
VRK3-225ENST00000601912 RRN3P2A6NIE6 340 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 LGALS16A8MUM7 142 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 SLC16A3O15427 465 aaKnown RBP19.74■□□□□ 0.75
VRK3-225ENST00000601912 KPNA6O60684 536 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 C22orf31O95567 290 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 F2P00734 622 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 HMGCRP04035 888 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 MYL3P08590 195 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 RARBP10826 455 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 EPB41P11171 864 aaKnown RBP19.74■□□□□ 0.75
VRK3-225ENST00000601912 ELNP15502 786 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 KLRC1P26715 233 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 TMOD1P28289 359 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 MARSP56192 900 aaKnown RBP19.74■□□□□ 0.75
VRK3-225ENST00000601912 MAP2K1Q02750 393 aaPredicted RBP19.74■□□□□ 0.75
VRK3-225ENST00000601912 UBXN1Q04323 297 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 STRN3Q13033 797 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 MAN2A1Q16706 1144 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 SPECC1LQ69YQ0 1117 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 ZNF296Q8WUU4 475 aaPredicted RBP19.74■□□□□ 0.75
VRK3-225ENST00000601912 KCNN1Q92952 543 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 KATNAL1Q9BW62 490 aa19.74■□□□□ 0.75
VRK3-225ENST00000601912 SUCLA2Q9P2R7 463 aaPredicted RBP19.74■□□□□ 0.75
VRK3-225ENST00000601912 ASAP2O43150 1006 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 TEX33O43247 280 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 PRKAR2AP13861 404 aaKnown RBP19.73■□□□□ 0.75
VRK3-225ENST00000601912 PRMT2P55345 433 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 GJA9P57773 515 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 TFDP1Q14186 410 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 GRIK4Q16099 956 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 CEP135Q66GS9 1140 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 CCDC186Q7Z3E2 898 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 FRMD5Q7Z6J6 570 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 SLC9A9Q8IVB4 645 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 PXYLP1Q8TE99 480 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 METTL14Q9HCE5 456 aaKnown RBP19.73■□□□□ 0.75
VRK3-225ENST00000601912 FRMD4BQ9Y2L6 1034 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 ADGRA3Q8IWK6 1321 aa19.73■□□□□ 0.75
VRK3-225ENST00000601912 K7ERI5 159 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 C6orf222P0C671 652 aaPredicted RBP19.72■□□□□ 0.75
VRK3-225ENST00000601912 PSMC2P35998 433 aaKnown RBP19.72■□□□□ 0.75
VRK3-225ENST00000601912 EFNA5P52803 228 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms