RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 ANKEF1Q9NU02 776 aa16.31■□□□□ 0.2
XRCC1-208ENST00000598422 PCDHB12Q9Y5F1 795 aa16.31■□□□□ 0.2
XRCC1-208ENST00000598422 PRRC2BQ5JSZ5 2229 aaKnown RBP16.3■□□□□ 0.2
XRCC1-208ENST00000598422 ZBTB39O15060 712 aa16.3■□□□□ 0.2
XRCC1-208ENST00000598422 DGAT1O75907 488 aa16.3■□□□□ 0.2
XRCC1-208ENST00000598422 SRGAP2CP0DJJ0 459 aa16.3■□□□□ 0.2
XRCC1-208ENST00000598422 LAMTOR4Q0VGL1 99 aa16.3■□□□□ 0.2
XRCC1-208ENST00000598422 CSPP1Q1MSJ5 1256 aa16.3■□□□□ 0.2
XRCC1-208ENST00000598422 TCEAL5Q5H9L2 206 aa16.3■□□□□ 0.2
XRCC1-208ENST00000598422 MCTP1Q6DN14 999 aa16.3■□□□□ 0.2
XRCC1-208ENST00000598422 EP400NLQ6ZTU2 488 aa16.3■□□□□ 0.2
XRCC1-208ENST00000598422 LRRC43Q8N309 656 aa16.3■□□□□ 0.2
XRCC1-208ENST00000598422 P2RX5Q93086 422 aa16.3■□□□□ 0.2
XRCC1-208ENST00000598422 PPP2R3CQ969Q6 453 aa16.3■□□□□ 0.2
XRCC1-208ENST00000598422 UHRF1Q96T88 793 aaPredicted RBP16.3■□□□□ 0.2
XRCC1-208ENST00000598422 TUFT1Q9NNX1 390 aa16.3■□□□□ 0.2
XRCC1-208ENST00000598422 ALG13Q9NP73 1137 aaKnown RBP16.3■□□□□ 0.2
XRCC1-208ENST00000598422 A0A0U1RQF3 1178 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 H3BQV1 296 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 ASAP2O43150 1006 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 SKIP12755 728 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 LAG3P18627 525 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 KCNA5P22460 613 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 TECP42680 631 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 PHKA2P46019 1235 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 KCNQ1P51787 676 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 TFDP1Q14186 410 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 MXD4Q14582 209 aaPredicted RBP16.29■□□□□ 0.2
XRCC1-208ENST00000598422 HAUS3Q68CZ6 603 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 THNSL1Q8IYQ7 743 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 KLHL23Q8NBE8 558 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 RNF149Q8NC42 400 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 PIGOQ8TEQ8 1089 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 PLAGL2Q9UPG8 496 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 SMC3Q9UQE7 1217 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 PRUNE2Q8WUY3 3088 aa16.29■□□□□ 0.2
XRCC1-208ENST00000598422 A0A0C4DFX4 3053 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 TTC3P53804 2025 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 MYH9P35579 1960 aaKnown RBP16.28■□□□□ 0.2
XRCC1-208ENST00000598422 USO1O60763 962 aaKnown RBP16.28■□□□□ 0.2
XRCC1-208ENST00000598422 ERLIN2O94905 339 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 EOMESO95936 686 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 ITGB1P05556 798 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 U2AF2P26368 475 aaKnown RBP eCLIP16.28■□□□□ 0.2
XRCC1-208ENST00000598422 RARRES1P49788 294 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 RAB27AP51159 221 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 NBR1Q14596 966 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 SRGAP1Q7Z6B7 1085 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 FERMT3Q86UX7 667 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 RAB34Q9BZG1 259 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 IFT122Q9HBG6 1241 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 AGPAT5Q9NUQ2 364 aa16.28■□□□□ 0.2
XRCC1-208ENST00000598422 TYW1Q9NV66 732 aaKnown RBP16.28■□□□□ 0.2
XRCC1-208ENST00000598422 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.28■□□□□ 0.2
XRCC1-208ENST00000598422 NCK2O43639 380 aa16.27■□□□□ 0.2
XRCC1-208ENST00000598422 CD2BP2O95400 341 aaKnown RBP16.27■□□□□ 0.2
XRCC1-208ENST00000598422 GJB2P29033 226 aa16.27■□□□□ 0.2
XRCC1-208ENST00000598422 COLGALT1Q8NBJ5 622 aa16.27■□□□□ 0.2
XRCC1-208ENST00000598422 POF1BQ8WVV4 589 aa16.27■□□□□ 0.2
XRCC1-208ENST00000598422 NACC1Q96RE7 527 aa16.27■□□□□ 0.2
XRCC1-208ENST00000598422 POLR3CQ9BUI4 534 aaPredicted RBP16.27■□□□□ 0.2
XRCC1-208ENST00000598422 MRPL9Q9BYD2 267 aaKnown RBP16.27■□□□□ 0.2
XRCC1-208ENST00000598422 POLR3FQ9H1D9 316 aaPredicted RBP16.27■□□□□ 0.2
XRCC1-208ENST00000598422 XPNPEP1Q9NQW7 623 aa16.27■□□□□ 0.2
XRCC1-208ENST00000598422 FAM105AQ9NUU6 356 aa16.27■□□□□ 0.2
XRCC1-208ENST00000598422 HCSTQ9UBK5 93 aa16.27■□□□□ 0.2
XRCC1-208ENST00000598422 ARHGEF35A5YM69 484 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 MED24O75448 989 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 FGF18O76093 207 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 XRCC6P12956 609 aaKnown RBP eCLIP16.26■□□□□ 0.19
XRCC1-208ENST00000598422 BMP1P13497 986 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 PPM1AP35813 382 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 CCT6AP40227 531 aaKnown RBP16.26■□□□□ 0.19
XRCC1-208ENST00000598422 UBE3AQ05086 875 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 NCBP1Q09161 790 aaKnown RBP16.26■□□□□ 0.19
XRCC1-208ENST00000598422 POTEGQ6S5H5 508 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 GLB1LQ6UWU2 654 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 CATSPER3Q86XQ3 398 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 SPPL3Q8TCT6 385 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 HELQQ8TDG4 1101 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 MICAL1Q8TDZ2 1067 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 RSPH1Q8WYR4 309 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 PABPC5Q96DU9 382 aaKnown RBP16.26■□□□□ 0.19
XRCC1-208ENST00000598422 ZNF558Q96NG5 402 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 CASD1Q96PB1 797 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 TRAIPQ9BWF2 469 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 RNF19AQ9NV58 838 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 CLDND1Q9NY35 253 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 CUL9Q8IWT3 2517 aa16.26■□□□□ 0.19
XRCC1-208ENST00000598422 A0A087WWV3 80 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 INO80B-WBP1J3KQ70 363 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 TNFRSF10AO00220 468 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 SPATA31C1P0DKV0 1188 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 ATF7P17544 494 aaPredicted RBP16.25■□□□□ 0.19
XRCC1-208ENST00000598422 RPA1P27694 616 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
XRCC1-208ENST00000598422 PCBP1Q15365 356 aaKnown RBP eCLIP16.25■□□□□ 0.19
XRCC1-208ENST00000598422 RILPL1Q5EBL4 403 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 CLLU1OSQ5K130 101 aa16.25■□□□□ 0.19
XRCC1-208ENST00000598422 MAEAQ7L5Y9 396 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms