RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 FMR1NBQ8N0W7 255 aaPredicted RBP24.48■■□□□ 1.51
CHMP2A-204ENST00000597848 GCOM2Q9BZD3 368 aaPredicted RBP24.48■■□□□ 1.51
CHMP2A-204ENST00000597848 LOXHD1Q8IVV2 1947 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 LRRIQ4A6NIV6 560 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 GHRP10912 638 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 LIG1P18858 919 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 RFC2P35250 354 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 MAPK7Q13164 816 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 CAPSQ13938 189 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 MBTPS1Q14703 1052 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 GRAMD1CQ8IYS0 662 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 DAW1Q8N136 415 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 ENGASEQ8NFI3 743 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 BSNDQ8WZ55 320 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 PAGE5Q96GU1 130 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 ODF2LQ9ULJ1 636 aa24.47■■□□□ 1.51
CHMP2A-204ENST00000597848 CCDC169A6NNP5 214 aa24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 NBNO60934 754 aa24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 IDEP14735 1019 aa24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 EIF4BP23588 611 aaKnown RBP24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 PHKA2P46019 1235 aa24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 PPIGQ13427 754 aaKnown RBP eCLIP24.46■■□□□ 1.511e-6■■■■□ 25.5
CHMP2A-204ENST00000597848 LPIN1Q14693 890 aa24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 FBXO47Q5MNV8 452 aa24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 RPUSD2Q8IZ73 545 aaKnown RBP24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 MYCT1Q8N699 235 aa24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 DEPTORQ8TB45 409 aa24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 CCDC34Q96HJ3 373 aa24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 OSBPL7Q9BZF2 842 aa24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 LMBRD1Q9NUN5 540 aa24.46■■□□□ 1.51
CHMP2A-204ENST00000597848 NR1I2O75469 434 aa24.45■■□□□ 1.5
CHMP2A-204ENST00000597848 PLS3P13797 630 aa24.45■■□□□ 1.5
CHMP2A-204ENST00000597848 PEX3P56589 373 aa24.45■■□□□ 1.5
CHMP2A-204ENST00000597848 DMP1Q13316 513 aaPredicted RBP24.45■■□□□ 1.5
CHMP2A-204ENST00000597848 SNW1Q13573 536 aaKnown RBP24.45■■□□□ 1.5
CHMP2A-204ENST00000597848 TMEM40Q8WWA1 233 aa24.45■■□□□ 1.5
CHMP2A-204ENST00000597848 TRIM9Q9C026 710 aa24.45■■□□□ 1.5
CHMP2A-204ENST00000597848 INO80BQ9C086 356 aaPredicted RBP24.45■■□□□ 1.5
CHMP2A-204ENST00000597848 BLZF1Q9H2G9 400 aa24.45■■□□□ 1.5
CHMP2A-204ENST00000597848 C17orf75Q9HAS0 396 aa24.45■■□□□ 1.5
CHMP2A-204ENST00000597848 NOC2LQ9Y3T9 749 aaKnown RBP24.45■■□□□ 1.5
CHMP2A-204ENST00000597848 RBAK-RBAKDNI3L0D1 243 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 KINO60870 393 aaKnown RBP24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 CSDE1O75534 798 aaKnown RBP24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 RPS6KA5O75582 802 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 ACRP10323 421 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 DARSP14868 501 aaKnown RBP24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 MAGEA10P43363 369 aaPredicted RBP24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 NAMPTP43490 491 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 ASIC1P78348 528 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 GPNMBQ14956 572 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 KANK3Q6NY19 840 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 TSHZ1Q6ZSZ6 1077 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 USP38Q8NB14 1042 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 DNAJC19Q96DA6 116 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 C7orf25Q9BPX7 421 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 IFT122Q9HBG6 1241 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 PARVGQ9HBI0 331 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 IL23AQ9NPF7 189 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 LARSQ9P2J5 1176 aaKnown RBP24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 KCNG1Q9UIX4 513 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 SQORQ9Y6N5 450 aa24.44■■□□□ 1.5
CHMP2A-204ENST00000597848 MKI67P46013 3256 aaKnown RBP24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 CASP1P29466 404 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 CD52P31358 61 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 NPTX2P47972 431 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 SMTNP53814 917 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 PTENP60484 403 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 POU5F1BQ06416 359 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 NFX1Q12986 1120 aaKnown RBP24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 PAK2Q13177 524 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 ODR4Q5SWX8 454 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 SRGAP1Q7Z6B7 1085 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 ZBTB8OSQ8IWT0 167 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 SEPT8Q92599 483 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 AGO3Q9H9G7 860 aaKnown RBP24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 KMT5AQ9NQR1 393 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 PANK4Q9NVE7 773 aa24.43■■□□□ 1.5
CHMP2A-204ENST00000597848 INO80B-WBP1J3KQ70 363 aa24.42■■□□□ 1.5
CHMP2A-204ENST00000597848 CXCL10P02778 98 aa24.42■■□□□ 1.5
CHMP2A-204ENST00000597848 FGFR4P22455 802 aa24.42■■□□□ 1.5
CHMP2A-204ENST00000597848 CUL4BQ13620 913 aa24.42■■□□□ 1.5
CHMP2A-204ENST00000597848 CCDC65Q8IXS2 484 aa24.42■■□□□ 1.5
CHMP2A-204ENST00000597848 TIGD1Q96MW7 591 aa24.42■■□□□ 1.5
CHMP2A-204ENST00000597848 KIFC3Q9BVG8 833 aa24.42■■□□□ 1.5
CHMP2A-204ENST00000597848 IFIH1Q9BYX4 1025 aaKnown RBP24.42■■□□□ 1.5
CHMP2A-204ENST00000597848 C2orf40Q9H1Z8 148 aa24.42■■□□□ 1.5
CHMP2A-204ENST00000597848 DACT1Q9NYF0 836 aa24.42■■□□□ 1.5
CHMP2A-204ENST00000597848 GPR182O15218 404 aa24.41■■□□□ 1.5
CHMP2A-204ENST00000597848 SLC16A4O15374 487 aa24.41■■□□□ 1.5
CHMP2A-204ENST00000597848 GTPBP6O43824 516 aaPredicted RBP24.41■■□□□ 1.5
CHMP2A-204ENST00000597848 PFKMP08237 780 aa24.41■■□□□ 1.5
CHMP2A-204ENST00000597848 GAP43P17677 238 aa24.41■■□□□ 1.5
CHMP2A-204ENST00000597848 SFPQP23246 707 aaKnown RBP eCLIP24.41■■□□□ 1.5
CHMP2A-204ENST00000597848 ZNF131P52739 623 aa24.41■■□□□ 1.5
CHMP2A-204ENST00000597848 HERC4Q5GLZ8 1057 aaPredicted RBP24.41■■□□□ 1.5
CHMP2A-204ENST00000597848 DBF4BQ8NFT6 615 aa24.41■■□□□ 1.5
CHMP2A-204ENST00000597848 SPIRE2Q8WWL2 714 aa24.41■■□□□ 1.5
CHMP2A-204ENST00000597848 MINDY3Q9H8M7 445 aa24.41■■□□□ 1.5
CHMP2A-204ENST00000597848 PADI3Q9ULW8 664 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms