RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 CCDC43Q96MW1 224 aaKnown RBP16.45■□□□□ 0.22
USE1-205ENST00000594724 INO80BQ9C086 356 aaPredicted RBP16.45■□□□□ 0.22
USE1-205ENST00000594724 ELAC1Q9H777 363 aaKnown RBP16.45■□□□□ 0.22
USE1-205ENST00000594724 TUFT1Q9NNX1 390 aa16.45■□□□□ 0.22
USE1-205ENST00000594724 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
USE1-205ENST00000594724 HCSTQ9UBK5 93 aa16.45■□□□□ 0.22
USE1-205ENST00000594724 RWDD3Q9Y3V2 267 aa16.45■□□□□ 0.22
USE1-205ENST00000594724 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.45■□□□□ 0.22
USE1-205ENST00000594724 GRM6O15303 877 aa16.44■□□□□ 0.22
USE1-205ENST00000594724 GAS2O43903 313 aaKnown RBP16.44■□□□□ 0.22
USE1-205ENST00000594724 XRCC6P12956 609 aaKnown RBP eCLIP16.44■□□□□ 0.22
USE1-205ENST00000594724 SFPQP23246 707 aaKnown RBP eCLIP16.44■□□□□ 0.22
USE1-205ENST00000594724 TFF2Q03403 129 aa16.44■□□□□ 0.22
USE1-205ENST00000594724 RNF149Q8NC42 400 aa16.44■□□□□ 0.22
USE1-205ENST00000594724 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
USE1-205ENST00000594724 POLR3CQ9BUI4 534 aaPredicted RBP16.44■□□□□ 0.22
USE1-205ENST00000594724 COL25A1Q9BXS0 654 aaPredicted RBP16.44■□□□□ 0.22
USE1-205ENST00000594724 MINDY3Q9H8M7 445 aa16.44■□□□□ 0.22
USE1-205ENST00000594724 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
USE1-205ENST00000594724 RNF19AQ9NV58 838 aa16.44■□□□□ 0.22
USE1-205ENST00000594724 NLRC5Q86WI3 1866 aa16.44■□□□□ 0.22
USE1-205ENST00000594724 A0A0U1RQF3 1178 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 ASAP2O43150 1006 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 USO1O60763 962 aaKnown RBP16.43■□□□□ 0.22
USE1-205ENST00000594724 DGAT1O75907 488 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 CSPG5O95196 566 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 RPA1P27694 616 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 FXR2P51116 673 aaKnown RBP eCLIP16.43■□□□□ 0.22
USE1-205ENST00000594724 CUL4AQ13619 759 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 PTPROQ16827 1216 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 SPOUT1Q5T280 376 aaKnown RBP16.43■□□□□ 0.22
USE1-205ENST00000594724 POTEGQ6S5H5 508 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 MAEAQ7L5Y9 396 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 ERMNQ8TAM6 284 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 ASAP3Q8TDY4 903 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 ATXN2LQ8WWM7 1075 aaKnown RBP16.43■□□□□ 0.22
USE1-205ENST00000594724 CASD1Q96PB1 797 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 NACC1Q96RE7 527 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.43■□□□□ 0.22
USE1-205ENST00000594724 CHST12Q9NRB3 414 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 TYW1Q9NV66 732 aaKnown RBP16.43■□□□□ 0.22
USE1-205ENST00000594724 LRWD1Q9UFC0 647 aa16.43■□□□□ 0.22
USE1-205ENST00000594724 PIN4Q9Y237 131 aaKnown RBP16.43■□□□□ 0.22
USE1-205ENST00000594724 ATF7P17544 494 aaPredicted RBP16.42■□□□□ 0.22
USE1-205ENST00000594724 ARL2P36404 184 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 CCT6AP40227 531 aaKnown RBP16.42■□□□□ 0.22
USE1-205ENST00000594724 MRPS5P82675 430 aaKnown RBP16.42■□□□□ 0.22
USE1-205ENST00000594724 IL17AQ16552 155 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 ECM1Q16610 540 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 LONRF3Q496Y0 759 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 TJAP1Q5JTD0 557 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 TWF2Q6IBS0 349 aaKnown RBP16.42■□□□□ 0.22
USE1-205ENST00000594724 SRGAP1Q7Z6B7 1085 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 ZNF598Q86UK7 904 aaKnown RBP16.42■□□□□ 0.22
USE1-205ENST00000594724 KLHL23Q8NBE8 558 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 ASB2Q96Q27 587 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 PLVAPQ9BX97 442 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 DACT1Q9NYF0 836 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 PLAGL2Q9UPG8 496 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 ARID2Q68CP9 1835 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 RALGAPA2Q2PPJ7 1873 aa16.42■□□□□ 0.22
USE1-205ENST00000594724 PP2D1A8MPX8 630 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 EOMESO95936 686 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 ITGB1P05556 798 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 PHKA2P46019 1235 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 PDIA5Q14554 519 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 MXD4Q14582 209 aaPredicted RBP16.41■□□□□ 0.22
USE1-205ENST00000594724 RILPL1Q5EBL4 403 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 CLLU1OSQ5K130 101 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 LRRC55Q6ZSA7 311 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 SPPL3Q8TCT6 385 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 LPPQ93052 612 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 P2RX5Q93086 422 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 HLA-CQ95604 372 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 TMEM117Q9H0C3 514 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 CWH43Q9H720 699 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 GPRC5CQ9NQ84 441 aa16.41■□□□□ 0.22
USE1-205ENST00000594724 DBR1Q9UK59 544 aaKnown RBP16.41■□□□□ 0.22
USE1-205ENST00000594724 FNDC1Q4ZHG4 1894 aaPredicted RBP16.4■□□□□ 0.22
USE1-205ENST00000594724 HOXA2O43364 376 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 GLRA2P23416 452 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 CDC25AP30304 524 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 HOXA11P31270 313 aaPredicted RBP16.4■□□□□ 0.22
USE1-205ENST00000594724 PTENP60484 403 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 CAPSQ13938 189 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 CAMK1Q14012 370 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 TCEAL5Q5H9L2 206 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 HAUS3Q68CZ6 603 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 DTHD1Q6ZMT9 781 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 ABI1Q8IZP0 508 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 IGSF22Q8N9C0 903 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 HELQQ8TDG4 1101 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 LMAN2LQ9H0V9 348 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 POLR3FQ9H1D9 316 aaPredicted RBP16.4■□□□□ 0.22
USE1-205ENST00000594724 AGPAT5Q9NUQ2 364 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 FAM105AQ9NUU6 356 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 COG5Q9UP83 839 aa16.4■□□□□ 0.22
USE1-205ENST00000594724 ARHGEF35A5YM69 484 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 MEIS3P2A8K0S8 358 aa16.39■□□□□ 0.21
USE1-205ENST00000594724 LAD1O00515 517 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms