RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 DAGLBQ8NCG7 672 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 RNF169Q8NCN4 708 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 BICD2Q8TD16 824 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 LPPQ93052 612 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 ZNF558Q96NG5 402 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 MAP7D2Q96T17 732 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 FDXACB1Q9BRP7 624 aaPredicted RBP12.02□□□□□ -0.49
USE1-203ENST00000593597 VN1R3Q9BXE9 311 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 NIFKQ9BYG3 293 aaKnown RBP12.02□□□□□ -0.49
USE1-203ENST00000593597 ZSWIM6Q9HCJ5 1215 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 GJB4Q9NTQ9 266 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 SEPT9Q9UHD8 586 aaPredicted RBP12.02□□□□□ -0.49
USE1-203ENST00000593597 VAV3Q9UKW4 847 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 PCDHA4Q9UN74 947 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 CFAP54Q96N23 3096 aa12.02□□□□□ -0.49
USE1-203ENST00000593597 TDRD15B5MCY1 1934 aaKnown RBP12.01□□□□□ -0.49
USE1-203ENST00000593597 C2orf71A6NGG8 1288 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 SP100P23497 879 aaPredicted RBP12.01□□□□□ -0.49
USE1-203ENST00000593597 SFNP31947 248 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 MRE11P49959 708 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 VCPP55072 806 aaKnown RBP12.01□□□□□ -0.49
USE1-203ENST00000593597 NLRP5P59047 1200 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 TBC1D8BQ0IIM8 1120 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 LONRF3Q496Y0 759 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 KANK3Q6NY19 840 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 ANO5Q75V66 913 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 MIER3Q7Z3K6 550 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 BLIDQ8IZY5 108 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 NLRP7Q8WX94 980 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 ENTPD7Q9NQZ7 604 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 NRBP2Q9NSY0 501 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 TCEAL9Q9UHQ7 104 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 HCFC2Q9Y5Z7 792 aa12.01□□□□□ -0.49
USE1-203ENST00000593597 HOXA2O43364 376 aa12□□□□□ -0.49
USE1-203ENST00000593597 CLASP2O75122 1294 aaKnown RBP12□□□□□ -0.49
USE1-203ENST00000593597 PDGFBP01127 241 aaPredicted RBP12□□□□□ -0.49
USE1-203ENST00000593597 TMOD1P28289 359 aa12□□□□□ -0.49
USE1-203ENST00000593597 PHKA2P46019 1235 aa12□□□□□ -0.49
USE1-203ENST00000593597 AFF1P51825 1210 aaKnown RBP12□□□□□ -0.49
USE1-203ENST00000593597 BCAR1P56945 870 aa12□□□□□ -0.49
USE1-203ENST00000593597 AKAP17AQ02040 695 aaKnown RBP12□□□□□ -0.49
USE1-203ENST00000593597 TCF15Q12870 199 aa12□□□□□ -0.49
USE1-203ENST00000593597 STK3Q13188 491 aa12□□□□□ -0.49
USE1-203ENST00000593597 INF2Q27J81 1249 aa12□□□□□ -0.49
USE1-203ENST00000593597 XKR3Q5GH77 459 aa12□□□□□ -0.49
USE1-203ENST00000593597 EARS2Q5JPH6 523 aaKnown RBP12□□□□□ -0.49
USE1-203ENST00000593597 PDE12Q6L8Q7 609 aaKnown RBP12□□□□□ -0.49
USE1-203ENST00000593597 RDM1Q8NG50 284 aa12□□□□□ -0.49
USE1-203ENST00000593597 AUTS2Q8WXX7 1259 aa12□□□□□ -0.49
USE1-203ENST00000593597 ZBP1Q9H171 429 aa12□□□□□ -0.49
USE1-203ENST00000593597 KCNH6Q9H252 994 aa12□□□□□ -0.49
USE1-203ENST00000593597 SMOC2Q9H3U7 446 aa12□□□□□ -0.49
USE1-203ENST00000593597 POMKQ9H5K3 350 aa12□□□□□ -0.49
USE1-203ENST00000593597 SPG21Q9NZD8 308 aa12□□□□□ -0.49
USE1-203ENST00000593597 KCNJ14Q9UNX9 436 aa12□□□□□ -0.49
USE1-203ENST00000593597 WDR87Q6ZQQ6 2873 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 MAFO75444 373 aaPredicted RBP11.99□□□□□ -0.49
USE1-203ENST00000593597 DEXIO95424 95 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 EOMESO95936 686 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 WEE2P0C1S8 567 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 ZSCAN20P17040 1043 aaPredicted RBP11.99□□□□□ -0.49
USE1-203ENST00000593597 PSMA5P28066 241 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 PPM1AP35813 382 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 NPEPPSP55786 919 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 SSRP1Q08945 709 aaKnown RBP11.99□□□□□ -0.49
USE1-203ENST00000593597 PTPN21Q16825 1174 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 MOXD1Q6UVY6 613 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 TMC7Q7Z402 723 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 ABI1Q8IZP0 508 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 MRPL43Q8N983 215 aaKnown RBP11.99□□□□□ -0.49
USE1-203ENST00000593597 OXER1Q8TDS5 423 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 HAS1Q92839 578 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 ZNF274Q96GC6 653 aaPredicted RBP11.99□□□□□ -0.49
USE1-203ENST00000593597 MFSD14AQ96MC6 490 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 PHF20Q9BVI0 1012 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 TRAIPQ9BWF2 469 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 NRDE2Q9H7Z3 1164 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 MINDY3Q9H8M7 445 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 IFT122Q9HBG6 1241 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 KCNMB3Q9NPA1 279 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 NGRNQ9NPE2 291 aaKnown RBP11.99□□□□□ -0.49
USE1-203ENST00000593597 RNF216Q9NWF9 866 aaPredicted RBP11.99□□□□□ -0.49
USE1-203ENST00000593597 DNAJB4Q9UDY4 337 aa11.99□□□□□ -0.49
USE1-203ENST00000593597 DOCK8Q8NF50 2099 aa11.98□□□□□ -0.49
USE1-203ENST00000593597 C2CD4DB7Z1M9 353 aa11.98□□□□□ -0.49
USE1-203ENST00000593597 OFD1O75665 1012 aa11.98□□□□□ -0.49
USE1-203ENST00000593597 CTDNEP1O95476 244 aa11.98□□□□□ -0.49
USE1-203ENST00000593597 SIGLEC14Q08ET2 396 aa11.98□□□□□ -0.49
USE1-203ENST00000593597 SCRN1Q12765 414 aa11.98□□□□□ -0.49
USE1-203ENST00000593597 SMC1AQ14683 1233 aaKnown RBP11.98□□□□□ -0.49
USE1-203ENST00000593597 UBXN11Q5T124 520 aa11.98□□□□□ -0.49
USE1-203ENST00000593597 AGMOQ6ZNB7 445 aa11.98□□□□□ -0.49
USE1-203ENST00000593597 ZNF280BQ86YH2 543 aa11.98□□□□□ -0.49
USE1-203ENST00000593597 RHPN2Q8IUC4 686 aa11.98□□□□□ -0.49
USE1-203ENST00000593597 C12orf76Q8N812 135 aaPredicted RBP11.98□□□□□ -0.49
USE1-203ENST00000593597 PBXIP1Q96AQ6 731 aa11.98□□□□□ -0.49
USE1-203ENST00000593597 SCLT1Q96NL6 688 aa11.98□□□□□ -0.49
USE1-203ENST00000593597 GCOM2Q9BZD3 368 aaPredicted RBP11.98□□□□□ -0.49
USE1-203ENST00000593597 TBC1D13Q9NVG8 400 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms