RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 CDKAL1Q5VV42 579 aa28.17■■■□□ 2.1
LDLRAD4-218ENST00000592991 MTHFD1LQ6UB35 978 aa28.17■■■□□ 2.1
LDLRAD4-218ENST00000592991 PRPF31Q8WWY3 499 aaKnown RBP28.17■■■□□ 2.1
LDLRAD4-218ENST00000592991 HMX1Q9NP08 348 aaPredicted RBP28.17■■■□□ 2.1
LDLRAD4-218ENST00000592991 SUCLA2Q9P2R7 463 aaPredicted RBP28.17■■■□□ 2.1
LDLRAD4-218ENST00000592991 PCDHB13Q9Y5F0 798 aa28.17■■■□□ 2.1
LDLRAD4-218ENST00000592991 LRRIQ4A6NIV6 560 aa28.16■■■□□ 2.1
LDLRAD4-218ENST00000592991 SMTNP53814 917 aa28.16■■■□□ 2.1
LDLRAD4-218ENST00000592991 IER5Q5VY09 327 aa28.16■■■□□ 2.1
LDLRAD4-218ENST00000592991 KLHDC9Q8NEP7 349 aa28.16■■■□□ 2.1
LDLRAD4-218ENST00000592991 TSG101Q99816 390 aa28.16■■■□□ 2.1
LDLRAD4-218ENST00000592991 SCN10AQ9Y5Y9 1956 aa28.16■■■□□ 2.1
LDLRAD4-218ENST00000592991 UBE4BO95155 1302 aa28.15■■■□□ 2.1
LDLRAD4-218ENST00000592991 DENND3A2RUS2 1198 aa28.15■■■□□ 2.1
LDLRAD4-218ENST00000592991 NKX3-2P78367 333 aa28.15■■■□□ 2.1
LDLRAD4-218ENST00000592991 LRRC63Q05C16 580 aa28.15■■■□□ 2.1
LDLRAD4-218ENST00000592991 KCNA10Q16322 511 aa28.15■■■□□ 2.1
LDLRAD4-218ENST00000592991 STXBP4Q6ZWJ1 553 aa28.15■■■□□ 2.1
LDLRAD4-218ENST00000592991 IRF2BP1Q8IU81 584 aa28.15■■■□□ 2.1
LDLRAD4-218ENST00000592991 MTG1Q9BT17 334 aaPredicted RBP28.15■■■□□ 2.1
LDLRAD4-218ENST00000592991 TGFB1I1O43294 461 aa28.14■■■□□ 2.1
LDLRAD4-218ENST00000592991 ADCY5O95622 1261 aa28.14■■■□□ 2.1
LDLRAD4-218ENST00000592991 HSPA8P11142 646 aaKnown RBP28.14■■■□□ 2.1
LDLRAD4-218ENST00000592991 GTF2BQ00403 316 aa28.14■■■□□ 2.1
LDLRAD4-218ENST00000592991 LAMTOR4Q0VGL1 99 aa28.14■■■□□ 2.1
LDLRAD4-218ENST00000592991 RHPN2Q8IUC4 686 aa28.14■■■□□ 2.1
LDLRAD4-218ENST00000592991 LINC01465Q8N7H1 131 aa28.14■■■□□ 2.1
LDLRAD4-218ENST00000592991 TCP11Q8WWU5 503 aa28.14■■■□□ 2.1
LDLRAD4-218ENST00000592991 PSPC1Q8WXF1 523 aaKnown RBP28.14■■■□□ 2.1
LDLRAD4-218ENST00000592991 PPP1R16BQ96T49 567 aa28.14■■■□□ 2.1
LDLRAD4-218ENST00000592991 JPH2Q9BR39 696 aaPredicted RBP28.14■■■□□ 2.1
LDLRAD4-218ENST00000592991 NTPCRQ9BSD7 190 aaKnown RBP28.14■■■□□ 2.1
LDLRAD4-218ENST00000592991 TISP43B9A030 160 aa28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 GAS2O43903 313 aaKnown RBP28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 ASGR1P07306 291 aa28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 CDK11BP21127 795 aaKnown RBP28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 NAMPTP43490 491 aa28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 ZNF200P98182 395 aaPredicted RBP28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 FANCCQ00597 558 aa28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 LRRC55Q6ZSA7 311 aa28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 CREBRFQ8IUR6 639 aa28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 KATNAL1Q9BW62 490 aa28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 ST6GALNAC4Q9H4F1 302 aa28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 ARHGAP28Q9P2N2 729 aa28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 HDAC6Q9UBN7 1215 aa28.14■■■□□ 2.09
LDLRAD4-218ENST00000592991 SIP14410 1827 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 CLIC2O15247 247 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 MAGEB2O15479 319 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 LHX8Q68G74 356 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 CCSAPQ6IQ19 270 aaPredicted RBP28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 TAS1R3Q7RTX0 852 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 EXOC8Q8IYI6 725 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 SYCP3Q8IZU3 236 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 RETREG2Q8NC44 543 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 DEPTORQ8TB45 409 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 TRIM5Q9C035 493 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 UNC93B1Q9H1C4 597 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 TYW1Q9NV66 732 aaKnown RBP28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 TBX20Q9UMR3 447 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 USP20Q9Y2K6 914 aa28.13■■■□□ 2.09
LDLRAD4-218ENST00000592991 ZEB2O60315 1214 aa28.12■■■□□ 2.09
LDLRAD4-218ENST00000592991 KPNA6O60684 536 aa28.12■■■□□ 2.09
LDLRAD4-218ENST00000592991 SRGAP2CP0DJJ0 459 aa28.12■■■□□ 2.09
LDLRAD4-218ENST00000592991 ALCAMQ13740 583 aa28.12■■■□□ 2.09
LDLRAD4-218ENST00000592991 PPP2R5AQ15172 486 aa28.12■■■□□ 2.09
LDLRAD4-218ENST00000592991 NFRKBQ6P4R8 1299 aa28.12■■■□□ 2.09
LDLRAD4-218ENST00000592991 SARM1Q6SZW1 724 aa28.12■■■□□ 2.09
LDLRAD4-218ENST00000592991 NLRP4Q96MN2 994 aa28.12■■■□□ 2.09
LDLRAD4-218ENST00000592991 ACCSQ96QU6 501 aa28.12■■■□□ 2.09
LDLRAD4-218ENST00000592991 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.12■■■□□ 2.09
LDLRAD4-218ENST00000592991 IFNKQ9P0W0 207 aa28.12■■■□□ 2.09
LDLRAD4-218ENST00000592991 NRCAMQ92823 1304 aa28.12■■■□□ 2.09
LDLRAD4-218ENST00000592991 RRN3P2A6NIE6 340 aa28.11■■■□□ 2.09
LDLRAD4-218ENST00000592991 VTNP04004 478 aa28.11■■■□□ 2.09
LDLRAD4-218ENST00000592991 CST5P28325 142 aaPredicted RBP28.11■■■□□ 2.09
LDLRAD4-218ENST00000592991 MTFR1Q15390 333 aa28.11■■■□□ 2.09
LDLRAD4-218ENST00000592991 RNF149Q8NC42 400 aa28.11■■■□□ 2.09
LDLRAD4-218ENST00000592991 THAP9Q9H5L6 903 aa28.11■■■□□ 2.09
LDLRAD4-218ENST00000592991 TRAF3IP3Q9Y228 551 aa28.11■■■□□ 2.09
LDLRAD4-218ENST00000592991 AKT3Q9Y243 479 aa28.11■■■□□ 2.09
LDLRAD4-218ENST00000592991 KCNJ18B7U540 433 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 PDXKO00764 312 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 ZNF75DP51815 510 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 KCNJ12Q14500 433 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 NBPF20Q3BBV1 942 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 SLC9C1Q4G0N8 1177 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 RUFY4Q6ZNE9 571 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 SLC17A8Q8NDX2 589 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 TREHO43280 583 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 CALUO43852 315 aaPredicted RBP28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 SERPINC1P01008 464 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 DNM2P50570 870 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 C7orf31Q8N865 590 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 CNOT6LQ96LI5 555 aaKnown RBP28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 FAM49AQ9H0Q0 323 aaPredicted RBP28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 GBP3Q9H0R5 595 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 AGPAT3Q9NRZ7 376 aa28.1■■■□□ 2.09
LDLRAD4-218ENST00000592991 RBAK-RBAKDNI3L0D1 243 aa28.09■■■□□ 2.09
LDLRAD4-218ENST00000592991 NR3C1P04150 777 aa28.09■■■□□ 2.09
LDLRAD4-218ENST00000592991 EDN1P05305 212 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms