RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 COLGALT1Q8NBJ5 622 aa5.93□□□□□ -1.46
ERCC1-216ENST00000592444 LIN37Q96GY3 246 aaPredicted RBP5.93□□□□□ -1.46
ERCC1-216ENST00000592444 FCRL3Q96P31 734 aaPredicted RBP5.93□□□□□ -1.46
ERCC1-216ENST00000592444 NELL2Q99435 816 aa5.93□□□□□ -1.46
ERCC1-216ENST00000592444 RPP25Q9BUL9 199 aaKnown RBP5.93□□□□□ -1.46
ERCC1-216ENST00000592444 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.93□□□□□ -1.46
ERCC1-216ENST00000592444 TRIM4Q9C037 500 aa5.93□□□□□ -1.46
ERCC1-216ENST00000592444 SEMA4CQ9C0C4 833 aa5.93□□□□□ -1.46
ERCC1-216ENST00000592444 SLC32A1Q9H598 525 aa5.93□□□□□ -1.46
ERCC1-216ENST00000592444 SLC38A10Q9HBR0 1119 aa5.93□□□□□ -1.46
ERCC1-216ENST00000592444 NUMBLQ9Y6R0 609 aa5.93□□□□□ -1.46
ERCC1-216ENST00000592444 NAV1Q8NEY1 1877 aa5.93□□□□□ -1.46
ERCC1-216ENST00000592444 CACNA1EQ15878 2313 aa5.93□□□□□ -1.46
ERCC1-216ENST00000592444 CSMD1Q96PZ7 3565 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 PCNX2A6NKB5 2137 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 CDC14CA4D256 554 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 SLC35F4A4IF30 521 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 APAF1O14727 1248 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 GHRP10912 638 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 ITPKBP27987 946 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 USP5P45974 858 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 RAP1GAPP47736 663 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 CCR3P51677 355 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 PLCB3Q01970 1234 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 HTR4Q13639 388 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 SMC1AQ14683 1233 aaKnown RBP5.92□□□□□ -1.46
ERCC1-216ENST00000592444 TAF1BQ53T94 588 aaPredicted RBP5.92□□□□□ -1.46
ERCC1-216ENST00000592444 TPRG1Q6ZUI0 275 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 CHST3Q7LGC8 479 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 KBTBD6Q86V97 674 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 NPAS4Q8IUM7 802 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 LINC01599Q8WXQ3 324 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 ATP6V0A1Q93050 837 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 OCSTAMPQ9BR26 566 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 KATNAL1Q9BW62 490 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 USP26Q9BXU7 913 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 GOPCQ9HD26 462 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 TMEM9BQ9NQ34 198 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 RNF146Q9NTX7 359 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 HSPBP1Q9NZL4 362 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 HMG20BQ9P0W2 317 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 CEP126Q9P2H0 1117 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 LRP2BPQ9P2M1 347 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 PRR12Q9ULL5 1215 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 PCDHGA5Q9Y5G8 931 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 C2orf16Q68DN1 1984 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 LRRK2Q5S007 2527 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 ZMYM2Q9UBW7 1377 aa5.92□□□□□ -1.46
ERCC1-216ENST00000592444 PLXNB3Q9ULL4 1909 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 NAV3Q8IVL0 2385 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 LNP1A1A4G5 178 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 ANHXE9PGG2 379 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 HAS3O00219 553 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 CDX4O14627 284 aaPredicted RBP5.91□□□□□ -1.46
ERCC1-216ENST00000592444 ARIH2O95376 493 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 NBPF7P0C2Y1 421 aaPredicted RBP5.91□□□□□ -1.46
ERCC1-216ENST00000592444 ZNF286BP0CG31 522 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 EEF2P13639 858 aaKnown RBP5.91□□□□□ -1.46
ERCC1-216ENST00000592444 AKR1B1P15121 316 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 IBSPP21815 317 aaPredicted RBP5.91□□□□□ -1.46
ERCC1-216ENST00000592444 CXCL12P48061 93 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 TIMM10P62072 90 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 ARHGAP4P98171 946 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 HNRNPUQ00839 825 aaKnown RBP eCLIP5.91□□□□□ -1.46
ERCC1-216ENST00000592444 RELBQ01201 579 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 GABPAQ06546 454 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 DGKDQ16760 1214 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 RNFT1Q5M7Z0 435 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 HIST2H2BCQ6DN03 193 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 ZNF852Q6ZMS4 543 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 PRICKLE2Q7Z3G6 844 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 FMNL3Q8IVF7 1028 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 WWC1Q8IX03 1113 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 CCDC146Q8IYE0 955 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 SCFD2Q8WU76 684 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 GLG1Q92896 1179 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 CHRDQ9H2X0 955 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 SFXN1Q9H9B4 322 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 CYP39A1Q9NYL5 469 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 SALL3Q9BXA9 1300 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 USP9YO00507 2555 aaPredicted RBP5.91□□□□□ -1.46
ERCC1-216ENST00000592444 PCNX1Q96RV3 2341 aa5.91□□□□□ -1.46
ERCC1-216ENST00000592444 TSC2P49815 1807 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 TEX51A0A1B0GUA7 166 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 TBKBP1A7MCY6 615 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 CAND2O75155 1236 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 AP1G2O75843 785 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 CXCL14O95715 111 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 F2P00734 622 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 POLR3DP05423 398 aaPredicted RBP5.9□□□□□ -1.46
ERCC1-216ENST00000592444 STAG3L1P0CL83 205 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 LAMP2P13473 410 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 KRT10P13645 584 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 C6P13671 934 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 HOXC13P31276 330 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 CTSOP43234 321 aaPredicted RBP5.9□□□□□ -1.46
ERCC1-216ENST00000592444 ALDH5A1P51649 535 aaPredicted RBP5.9□□□□□ -1.46
ERCC1-216ENST00000592444 OAZ1P54368 228 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 FAM193AP78312 1265 aa5.9□□□□□ -1.46
ERCC1-216ENST00000592444 CYP4F3Q08477 520 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms