RNA–Protein interactions for RNA: ENST00000591890.5

H3F3B-210, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-210ENST00000591890 SCLT1Q96NL6 688 aa12.05□□□□□ -0.48
H3F3B-210ENST00000591890 CASD1Q96PB1 797 aa12.05□□□□□ -0.48
H3F3B-210ENST00000591890 PLVAPQ9BX97 442 aa12.05□□□□□ -0.48
H3F3B-210ENST00000591890 GCOM2Q9BZD3 368 aaPredicted RBP12.05□□□□□ -0.48
H3F3B-210ENST00000591890 CWH43Q9H720 699 aa12.05□□□□□ -0.48
H3F3B-210ENST00000591890 MINDY3Q9H8M7 445 aa12.05□□□□□ -0.48
H3F3B-210ENST00000591890 ALG13Q9NP73 1137 aaKnown RBP12.05□□□□□ -0.48
H3F3B-210ENST00000591890 LRFN2Q9ULH4 789 aa12.05□□□□□ -0.48
H3F3B-210ENST00000591890 COG5Q9UP83 839 aa12.05□□□□□ -0.48
H3F3B-210ENST00000591890 PLAGL2Q9UPG8 496 aa12.05□□□□□ -0.48
H3F3B-210ENST00000591890 RWDD3Q9Y3V2 267 aa12.05□□□□□ -0.48
H3F3B-210ENST00000591890 PPME1Q9Y570 386 aa12.05□□□□□ -0.48
H3F3B-210ENST00000591890 COL4A3BPQ9Y5P4 624 aa12.05□□□□□ -0.48
H3F3B-210ENST00000591890 A0A087WWV3 80 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 A0A0U1RQF3 1178 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 TBKBP1A7MCY6 615 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 MED24O75448 989 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 RARRES1P49788 294 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 DNM2P50570 870 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 LAMTOR4Q0VGL1 99 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 ZNF174Q15697 407 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 TIGD5Q53EQ6 642 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 XKR9Q5GH70 373 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 TTC38Q5R3I4 469 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 FAM184AQ8NB25 1140 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 KLHL23Q8NBE8 558 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 NEK9Q8TD19 979 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 P2RX5Q93086 422 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 NECAB3Q96P71 396 aaPredicted RBP12.04□□□□□ -0.48
H3F3B-210ENST00000591890 JPH2Q9BR39 696 aaPredicted RBP12.04□□□□□ -0.48
H3F3B-210ENST00000591890 TRAIPQ9BWF2 469 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 NSUN3Q9H649 340 aaKnown RBP12.04□□□□□ -0.48
H3F3B-210ENST00000591890 UBE2ZQ9H832 354 aaPredicted RBP12.04□□□□□ -0.48
H3F3B-210ENST00000591890 ATP6V0A4Q9HBG4 840 aa12.04□□□□□ -0.48
H3F3B-210ENST00000591890 TYW1Q9NV66 732 aaKnown RBP12.04□□□□□ -0.48
H3F3B-210ENST00000591890 MEIS3P2A8K0S8 358 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 ST18O60284 1047 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 CSPG5O95196 566 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 OR52Z1P0C646 297 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 SFPQP23246 707 aaKnown RBP eCLIP12.03□□□□□ -0.48
H3F3B-210ENST00000591890 IRS1P35568 1242 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 CDC42EP1Q00587 391 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 ORC2Q13416 577 aaPredicted RBP12.03□□□□□ -0.48
H3F3B-210ENST00000591890 OTUD6AQ7L8S5 288 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 FERMT3Q86UX7 667 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 CATSPER3Q86XQ3 398 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 SPPL3Q8TCT6 385 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 ASAP3Q8TDY4 903 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 PIGOQ8TEQ8 1089 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 PSPC1Q8WXF1 523 aaKnown RBP12.03□□□□□ -0.48
H3F3B-210ENST00000591890 SYMPKQ92797 1274 aaKnown RBP12.03□□□□□ -0.48
H3F3B-210ENST00000591890 LMAN2LQ9H0V9 348 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 ANKEF1Q9NU02 776 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 AGPAT5Q9NUQ2 364 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 PCDHGC5Q9Y5F6 944 aa12.03□□□□□ -0.48
H3F3B-210ENST00000591890 BDP1A6H8Y1 2624 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 GAS2O43903 313 aaKnown RBP12.02□□□□□ -0.49
H3F3B-210ENST00000591890 SRGAP2CP0DJJ0 459 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 ZSCAN20P17040 1043 aaPredicted RBP12.02□□□□□ -0.49
H3F3B-210ENST00000591890 HOXA11P31270 313 aaPredicted RBP12.02□□□□□ -0.49
H3F3B-210ENST00000591890 GTF2F1P35269 517 aaKnown RBP eCLIP12.02□□□□□ -0.49
H3F3B-210ENST00000591890 LTBRP36941 435 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 PBX3P40426 434 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 TECP42680 631 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 PHKA2P46019 1235 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 TRAPPC10P48553 1259 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 HYAL1Q12794 435 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 CAPSQ13938 189 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 ECM1Q16610 540 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 CTC1Q2NKJ3 1217 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 NAALADL2Q58DX5 795 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 POTEGQ6S5H5 508 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 ADGRD2Q7Z7M1 963 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 COLGALT1Q8NBJ5 622 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 MTRQ99707 1265 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 TMEM117Q9H0C3 514 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 CHST12Q9NRB3 414 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 PIN4Q9Y237 131 aaKnown RBP12.02□□□□□ -0.49
H3F3B-210ENST00000591890 PCDHB6Q9Y5E3 794 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 BRWD1Q9NSI6 2320 aa12.02□□□□□ -0.49
H3F3B-210ENST00000591890 ABCB7O75027 752 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 KCNA5P22460 613 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 GLRA2P23416 452 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 GJB2P29033 226 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 ARL2P36404 184 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
H3F3B-210ENST00000591890 IL17AQ16552 155 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 AMHR2Q16671 573 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 AAK1Q2M2I8 961 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 LEXMQ3ZCV2 418 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 UBXN11Q5T124 520 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 CATSPER4Q7RTX7 472 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
H3F3B-210ENST00000591890 EXOC8Q8IYI6 725 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 LRRC43Q8N309 656 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 RNF149Q8NC42 400 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 RNF169Q8NCN4 708 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.01□□□□□ -0.49
H3F3B-210ENST00000591890 HELQQ8TDG4 1101 aa12.01□□□□□ -0.49
H3F3B-210ENST00000591890 POF1BQ8WVV4 589 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms