RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 MBLAC1A4D2B0 266 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-224ENST00000591764 TMEM221A6NGB7 291 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 M0R296 226 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 PIK3CDO00329 1044 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 ENPP3O14638 875 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 MAFGO15525 162 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 MARK3P27448 753 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 PHKA2P46019 1235 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 GNAQP50148 359 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 MRPS6P82932 125 aaKnown RBP9.4□□□□□ -0.9
DNMT1-224ENST00000591764 MGAT3Q09327 533 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 PAK2Q13177 524 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 ADAM15Q13444 863 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 MTMR1Q13613 665 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 WDR44Q5JSH3 913 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 SPOUT1Q5T280 376 aaKnown RBP9.4□□□□□ -0.9
DNMT1-224ENST00000591764 B4GALNT3Q6L9W6 998 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 RUFY4Q6ZNE9 571 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 PLEKHM2Q8IWE5 1019 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 NCOA7Q8NI08 942 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 DNAJB3Q8WWF6 145 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 ZNF689Q96CS4 500 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-224ENST00000591764 SCARF2Q96GP6 870 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-224ENST00000591764 CDCA3Q99618 268 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-224ENST00000591764 LZTS2Q9BRK4 669 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 SPZ1Q9BXG8 430 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
DNMT1-224ENST00000591764 PRM3Q9NNZ6 103 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 ALG13Q9NP73 1137 aaKnown RBP9.4□□□□□ -0.9
DNMT1-224ENST00000591764 PCDHB12Q9Y5F1 795 aa9.4□□□□□ -0.9
DNMT1-224ENST00000591764 SPDYE3A6NKU9 549 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 DDAH1O94760 285 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 F11P03951 625 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 LINC00271P0C7V0 271 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 SCG2P13521 617 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 NUCB1Q02818 461 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 UBE3AQ05086 875 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 DLX2Q07687 328 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-224ENST00000591764 SIGLEC14Q08ET2 396 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 SEMA3FQ13275 785 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 PDE12Q6L8Q7 609 aaKnown RBP9.39□□□□□ -0.91
DNMT1-224ENST00000591764 CYB5R4Q7L1T6 521 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 SMC5Q8IY18 1101 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 MICAL1Q8TDZ2 1067 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 MSLNLQ96KJ4 702 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 MAP3K14Q99558 947 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 PHF7Q9BWX1 381 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-224ENST00000591764 FAM49AQ9H0Q0 323 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-224ENST00000591764 PSTPIP2Q9H939 334 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 GPAMQ9HCL2 828 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 JPH1Q9HDC5 661 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-224ENST00000591764 TRPV2Q9Y5S1 764 aa9.39□□□□□ -0.91
DNMT1-224ENST00000591764 MRPL42Q9Y6G3 142 aaKnown RBP9.39□□□□□ -0.91
DNMT1-224ENST00000591764 DNMT3AQ9Y6K1 912 aaPredicted RBP9.39□□□□□ -0.91
DNMT1-224ENST00000591764 CACNA1HO95180 2353 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 LOC730098B7Z3J9 87 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 CYTH3O43739 400 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 ITGB1P05556 798 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 KCNA2P16389 499 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 ATF7P17544 494 aaPredicted RBP9.38□□□□□ -0.91
DNMT1-224ENST00000591764 SMARCA1P28370 1054 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 CD52P31358 61 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 GTF2F1P35269 517 aaKnown RBP eCLIP9.38□□□□□ -0.91
DNMT1-224ENST00000591764 NRIP1P48552 1158 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 IGBP1P78318 339 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 ZXDAP98168 799 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 TROAPQ12815 778 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 PAN2Q504Q3 1202 aaKnown RBP9.38□□□□□ -0.91
DNMT1-224ENST00000591764 USP17L6PQ6QN14 398 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 CASC1Q6TDU7 716 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 PHTF2Q8N3S3 785 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 NME8Q8N427 588 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 FBXL6Q8N531 539 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 KLHL23Q8NBE8 558 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 POF1BQ8WVV4 589 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 PIBF1Q8WXW3 757 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 SNX27Q96L92 541 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 NEK1Q96PY6 1258 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 SDF4Q9BRK5 362 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 OSBPL7Q9BZF2 842 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 BCAS3Q9H6U6 928 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 TLE6Q9H808 572 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 TLR9Q9NR96 1032 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 C1orf112Q9NSG2 853 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 USP15Q9Y4E8 981 aaPredicted RBP9.38□□□□□ -0.91
DNMT1-224ENST00000591764 PCDHB7Q9Y5E2 793 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 TRIOO75962 3097 aa9.38□□□□□ -0.91
DNMT1-224ENST00000591764 CNTNAP5Q8WYK1 1306 aa9.37□□□□□ -0.91
DNMT1-224ENST00000591764 IGSF9BQ9UPX0 1349 aa9.37□□□□□ -0.91
DNMT1-224ENST00000591764 DENND3A2RUS2 1198 aa9.37□□□□□ -0.91
DNMT1-224ENST00000591764 LINC01565O15544 149 aa9.37□□□□□ -0.91
DNMT1-224ENST00000591764 CALM1P0DP23 149 aa9.37□□□□□ -0.91
DNMT1-224ENST00000591764 CALM2P0DP24 149 aa9.37□□□□□ -0.91
DNMT1-224ENST00000591764 CALM3P0DP25 149 aa9.37□□□□□ -0.91
DNMT1-224ENST00000591764 SLC26A2P50443 739 aa9.37□□□□□ -0.91
DNMT1-224ENST00000591764 BMS1Q14692 1282 aaKnown RBP9.37□□□□□ -0.91
DNMT1-224ENST00000591764 CBX2Q14781 532 aaPredicted RBP9.37□□□□□ -0.91
DNMT1-224ENST00000591764 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
DNMT1-224ENST00000591764 NFXL1Q6ZNB6 911 aa9.37□□□□□ -0.91
DNMT1-224ENST00000591764 RBM23Q86U06 439 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms