RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 DEFB128Q7Z7B8 93 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 NEK9Q8TD19 979 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 NSUN4Q96CB9 384 aaKnown RBP9.4□□□□□ -0.9
SMAD4-209ENST00000589941 CHMP4AQ9BY43 222 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 KIAA1683Q9H0B3 1180 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 SIL1Q9H173 461 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 PI4KBQ9UBF8 816 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 SAP30BPQ9UHR5 308 aaKnown RBP9.4□□□□□ -0.9
SMAD4-209ENST00000589941 PALD1Q9ULE6 856 aa9.4□□□□□ -0.9
SMAD4-209ENST00000589941 ACACBO00763 2458 aa9.4□□□□□ -0.91
SMAD4-209ENST00000589941 MICAL3Q7RTP6 2002 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 MYO7AQ13402 2215 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 ASTN1O14525 1302 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 PRR19A6NJB7 356 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 TLR3O15455 904 aaKnown RBP9.39□□□□□ -0.91
SMAD4-209ENST00000589941 TGFB1P01137 390 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 ID4P47928 161 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 FANCCQ00597 558 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 BEX3Q00994 111 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 CDK5R2Q13319 367 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 ZNF792Q3KQV3 632 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 HS2ST1Q7LGA3 356 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 HDXQ7Z353 690 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 ZAR1Q86SH2 424 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 ADGRA1Q86SQ6 560 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 HERC6Q8IVU3 1022 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 ABRAQ8N0Z2 381 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 CRACR2BQ8N4Y2 399 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-209ENST00000589941 ZGPATQ8N5A5 531 aaKnown RBP9.39□□□□□ -0.91
SMAD4-209ENST00000589941 SLC43A3Q8NBI5 491 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 ATG4CQ96DT6 458 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 UPF3AQ9H1J1 476 aaKnown RBP9.39□□□□□ -0.91
SMAD4-209ENST00000589941 GNL3LQ9NVN8 582 aaKnown RBP9.39□□□□□ -0.91
SMAD4-209ENST00000589941 ZHX1Q9UKY1 873 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-209ENST00000589941 PCOLCE2Q9UKZ9 415 aa9.39□□□□□ -0.91
SMAD4-209ENST00000589941 KIAA1671Q9BY89 1806 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 PDS5AQ29RF7 1337 aaKnown RBP9.38□□□□□ -0.91
SMAD4-209ENST00000589941 SCN10AQ9Y5Y9 1956 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 FAM221AA4D161 298 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 TMEM221A6NGB7 291 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 FAM170BA6NMN3 283 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 M0R296 226 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 FANCGO15287 622 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 SNAI1O95863 264 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-209ENST00000589941 F13A1P00488 732 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 GUCY1A2P33402 732 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 RRP1P56182 461 aaKnown RBP9.38□□□□□ -0.91
SMAD4-209ENST00000589941 PWP1Q13610 501 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 RAB3GAP1Q15042 981 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 HERC4Q5GLZ8 1057 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-209ENST00000589941 ZMYM1Q5SVZ6 1142 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 TGFBRAP1Q8WUH2 860 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 ATOH1Q92858 354 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-209ENST00000589941 IPO9Q96P70 1041 aaKnown RBP9.38□□□□□ -0.91
SMAD4-209ENST00000589941 SLC9A7Q96T83 725 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 TANGO6Q9C0B7 1094 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 MROH8Q9H579 483 aa9.38□□□□□ -0.91
SMAD4-209ENST00000589941 SSU72Q9NP77 194 aaKnown RBP9.38□□□□□ -0.91
SMAD4-209ENST00000589941 RALYQ9UKM9 306 aaKnown RBP9.38□□□□□ -0.91
SMAD4-209ENST00000589941 ATRXP46100 2492 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 A0A1W2PRG0 241 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 H0Y858 1186 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 FCER1AP12319 257 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 ZNF76P36508 570 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 PSMC6P62333 389 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 RPL6Q02878 288 aaKnown RBP9.37□□□□□ -0.91
SMAD4-209ENST00000589941 TMEM132BQ14DG7 1078 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 CXCL17Q6UXB2 119 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 ADHFE1Q8IWW8 467 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 GOLM1Q8NBJ4 401 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 CCDC136Q96JN2 1154 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 MMP19Q99542 508 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 FBRSQ9HAH7 460 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 TLR9Q9NR96 1032 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 AATFQ9NY61 560 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMAD4-209ENST00000589941 SLC5A4Q9NY91 659 aa9.37□□□□□ -0.91
SMAD4-209ENST00000589941 BAZ2AQ9UIF9 1905 aaKnown RBP9.37□□□□□ -0.91
SMAD4-209ENST00000589941 DUSP11O75319 330 aaKnown RBP9.36□□□□□ -0.91
SMAD4-209ENST00000589941 CILPO75339 1184 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 VAMP4O75379 141 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 CYP2C9P11712 490 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 USP14P54578 494 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 GJA9P57773 515 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 CLUL1Q15846 466 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 FBXL19Q6PCT2 694 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 FBXO27Q8NI29 283 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 PPP1R13LQ8WUF5 828 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 GATAD2BQ8WXI9 593 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 FGD4Q96M96 766 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 PSMG3-AS1Q96PY0 264 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 FSD1Q9BTV5 496 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 WNT10AQ9GZT5 417 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 DHX36Q9H2U1 1008 aaKnown RBP9.36□□□□□ -0.91
SMAD4-209ENST00000589941 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 RNF112Q9ULX5 631 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 CNPY2Q9Y2B0 182 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 CHD8Q9HCK8 2581 aa9.36□□□□□ -0.91
SMAD4-209ENST00000589941 CEP250Q9BV73 2442 aa9.35□□□□□ -0.91
SMAD4-209ENST00000589941 GREB1LQ9C091 1923 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-209ENST00000589941 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms