RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 ZNF174Q15697 407 aa12.92□□□□□ -0.34
RFX1-204ENST00000588885 XKR9Q5GH70 373 aa12.92□□□□□ -0.34
RFX1-204ENST00000588885 SPOUT1Q5T280 376 aaKnown RBP12.92□□□□□ -0.34
RFX1-204ENST00000588885 EP400NLQ6ZTU2 488 aa12.92□□□□□ -0.34
RFX1-204ENST00000588885 MRPL38Q96DV4 380 aaKnown RBP12.92□□□□□ -0.34
RFX1-204ENST00000588885 NECAB3Q96P71 396 aaPredicted RBP12.92□□□□□ -0.34
RFX1-204ENST00000588885 EIF2AK1Q9BQI3 630 aaKnown RBP12.92□□□□□ -0.34
RFX1-204ENST00000588885 FDXACB1Q9BRP7 624 aaPredicted RBP12.92□□□□□ -0.34
RFX1-204ENST00000588885 GCOM2Q9BZD3 368 aaPredicted RBP12.92□□□□□ -0.34
RFX1-204ENST00000588885 TMEM60Q9H2L4 133 aa12.92□□□□□ -0.34
RFX1-204ENST00000588885 TTC12Q9H892 705 aaPredicted RBP12.92□□□□□ -0.34
RFX1-204ENST00000588885 ATP6V0A4Q9HBG4 840 aa12.92□□□□□ -0.34
RFX1-204ENST00000588885 C1orf112Q9NSG2 853 aa12.92□□□□□ -0.34
RFX1-204ENST00000588885 HCSTQ9UBK5 93 aa12.92□□□□□ -0.34
RFX1-204ENST00000588885 WDR81Q562E7 1941 aa12.92□□□□□ -0.34
RFX1-204ENST00000588885 IGKV6-21A0A0C4DH24 114 aa12.91□□□□□ -0.34
RFX1-204ENST00000588885 DKC1O60832 514 aaKnown RBP eCLIP12.91□□□□□ -0.34
RFX1-204ENST00000588885 SRGAP2CP0DJJ0 459 aa12.91□□□□□ -0.34
RFX1-204ENST00000588885 POLGP54098 1239 aaPredicted RBP12.91□□□□□ -0.34
RFX1-204ENST00000588885 FAM189BP81408 668 aa12.91□□□□□ -0.34
RFX1-204ENST00000588885 LONRF3Q496Y0 759 aa12.91□□□□□ -0.34
RFX1-204ENST00000588885 TCEAL5Q5H9L2 206 aa12.91□□□□□ -0.34
RFX1-204ENST00000588885 OTUD6AQ7L8S5 288 aa12.91□□□□□ -0.34
RFX1-204ENST00000588885 CMTR2Q8IYT2 770 aaKnown RBP12.91□□□□□ -0.34
RFX1-204ENST00000588885 PRPF31Q8WWY3 499 aaKnown RBP12.91□□□□□ -0.34
RFX1-204ENST00000588885 CLP1Q92989 425 aaKnown RBP12.91□□□□□ -0.34
RFX1-204ENST00000588885 NLRP4Q96MN2 994 aa12.91□□□□□ -0.34
RFX1-204ENST00000588885 MTMR9Q96QG7 549 aa12.91□□□□□ -0.34
RFX1-204ENST00000588885 C11orf84Q9BUA3 381 aaPredicted RBP12.91□□□□□ -0.34
RFX1-204ENST00000588885 ZSWIM4Q9H7M6 989 aa12.91□□□□□ -0.34
RFX1-204ENST00000588885 TYW1Q9NV66 732 aaKnown RBP12.91□□□□□ -0.34
RFX1-204ENST00000588885 RB1P06400 928 aa12.9□□□□□ -0.34
RFX1-204ENST00000588885 BMP1P13497 986 aa12.9□□□□□ -0.34
RFX1-204ENST00000588885 HMGN5P82970 282 aaKnown RBP12.9□□□□□ -0.34
RFX1-204ENST00000588885 C4orf19Q8IY42 314 aa12.9□□□□□ -0.34
RFX1-204ENST00000588885 KLHL23Q8NBE8 558 aa12.9□□□□□ -0.34
RFX1-204ENST00000588885 FBXO18Q8NFZ0 1043 aa12.9□□□□□ -0.34
RFX1-204ENST00000588885 SLC7A3Q8WY07 619 aa12.9□□□□□ -0.34
RFX1-204ENST00000588885 PLAGL2Q9UPG8 496 aa12.9□□□□□ -0.34
RFX1-204ENST00000588885 RWDD3Q9Y3V2 267 aa12.9□□□□□ -0.34
RFX1-204ENST00000588885 MYO7AQ13402 2215 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 C5orf67F2Z3F1 127 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 ATMINO43313 823 aaPredicted RBP12.89□□□□□ -0.35
RFX1-204ENST00000588885 ITGB1P05556 798 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 KCNA5P22460 613 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 DNAJB1P25685 340 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 TECP42680 631 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 CDC42EP1Q00587 391 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 PKP1Q13835 747 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 NBR1Q14596 966 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 EMC2Q15006 297 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 ECHDC2Q86YB7 292 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 PIGOQ8TEQ8 1089 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 HSD17B14Q9BPX1 270 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 JPH2Q9BR39 696 aaPredicted RBP12.89□□□□□ -0.35
RFX1-204ENST00000588885 FOXP1Q9H334 677 aaPredicted RBP12.89□□□□□ -0.35
RFX1-204ENST00000588885 IGFLR1Q9H665 355 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 UBE2ZQ9H832 354 aaPredicted RBP12.89□□□□□ -0.35
RFX1-204ENST00000588885 TMEM161AQ9NX61 479 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 COL4A3BPQ9Y5P4 624 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 KIAA1671Q9BY89 1806 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 ATG2AQ2TAZ0 1938 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 TTC3P53804 2025 aa12.89□□□□□ -0.35
RFX1-204ENST00000588885 COL9A1P20849 921 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 RFC5P40937 340 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 LAMTOR4Q0VGL1 99 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 TIGD5Q53EQ6 642 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 TTC38Q5R3I4 469 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 CATSPER4Q7RTX7 472 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 NOSTRINQ8IVI9 506 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 ABI1Q8IZP0 508 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 SPPL3Q8TCT6 385 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 PSPC1Q8WXF1 523 aaKnown RBP12.88□□□□□ -0.35
RFX1-204ENST00000588885 CCDC43Q96MW1 224 aaKnown RBP12.88□□□□□ -0.35
RFX1-204ENST00000588885 PLVAPQ9BX97 442 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 NSUN3Q9H649 340 aaKnown RBP12.88□□□□□ -0.35
RFX1-204ENST00000588885 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
RFX1-204ENST00000588885 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 RNF19AQ9NV58 838 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
RFX1-204ENST00000588885 PIN4Q9Y237 131 aaKnown RBP12.88□□□□□ -0.35
RFX1-204ENST00000588885 PCDHGC5Q9Y5F6 944 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 BDP1A6H8Y1 2624 aa12.88□□□□□ -0.35
RFX1-204ENST00000588885 A0A0U1RQF3 1178 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 H3BQ06 376 aaPredicted RBP12.87□□□□□ -0.35
RFX1-204ENST00000588885 OR52Z1P0C646 297 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 SFPQP23246 707 aaKnown RBP eCLIP12.87□□□□□ -0.35
RFX1-204ENST00000588885 GTF2F1P35269 517 aaKnown RBP eCLIP12.87□□□□□ -0.35
RFX1-204ENST00000588885 IRS1P35568 1242 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 PBX3P40426 434 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 CAMK1Q14012 370 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 CLLU1OSQ5K130 101 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 MCTP1Q6DN14 999 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 TWF2Q6IBS0 349 aaKnown RBP12.87□□□□□ -0.35
RFX1-204ENST00000588885 LRRC55Q6ZSA7 311 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 MAEAQ7L5Y9 396 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 ZNF410Q86VK4 478 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 HELQQ8TDG4 1101 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms