RNA–Protein interactions for RNA: ENST00000588459.1

RPRD1A-206, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-206ENST00000588459 COG5Q9UP83 839 aa15.33■□□□□ 0.04
RPRD1A-206ENST00000588459 PPME1Q9Y570 386 aa15.33■□□□□ 0.04
RPRD1A-206ENST00000588459 ITGB1P05556 798 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 SRGAP2CP0DJJ0 459 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 TECP42680 631 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 LAMTOR4Q0VGL1 99 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 CATSPER4Q7RTX7 472 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 ECHDC2Q86YB7 292 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 KLHL23Q8NBE8 558 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 ADAMTS19Q8TE59 1207 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 PIGOQ8TEQ8 1089 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 PSPC1Q8WXF1 523 aaKnown RBP15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 CCDC43Q96MW1 224 aaKnown RBP15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 MTRQ99707 1265 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 PLVAPQ9BX97 442 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 ELAC1Q9H777 363 aaKnown RBP15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 IFT122Q9HBG6 1241 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 XPNPEP1Q9NQW7 623 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 RNF19AQ9NV58 838 aa15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 NOL7Q9UMY1 257 aaKnown RBP15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 PIN4Q9Y237 131 aaKnown RBP15.32■□□□□ 0.04
RPRD1A-206ENST00000588459 MED24O75448 989 aa15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 LYPLA2O95372 231 aa15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 DNAJB1P25685 340 aa15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 U2AF2P26368 475 aaKnown RBP eCLIP15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 GJB2P29033 226 aa15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 AAK1Q2M2I8 961 aa15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 TWF2Q6IBS0 349 aaKnown RBP15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 EXOC8Q8IYI6 725 aa15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 TCP11Q8WWU5 503 aa15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 INO80BQ9C086 356 aaPredicted RBP15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 NSUN3Q9H649 340 aaKnown RBP15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 UBE2ZQ9H832 354 aaPredicted RBP15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 MINDY3Q9H8M7 445 aa15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 TYW1Q9NV66 732 aaKnown RBP15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 PLAGL2Q9UPG8 496 aa15.31■□□□□ 0.04
RPRD1A-206ENST00000588459 GAS2O43903 313 aaKnown RBP15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 SPATA31C1P0DKV0 1188 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 ATF7P17544 494 aaPredicted RBP15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 TRAPPC10P48553 1259 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 RARRES1P49788 294 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 ORC2Q13416 577 aaPredicted RBP15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 LONRF3Q496Y0 759 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 CLLU1OSQ5K130 101 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 MCTP1Q6DN14 999 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 EP400NLQ6ZTU2 488 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 ZNF598Q86UK7 904 aaKnown RBP15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 FERMT3Q86UX7 667 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 ABI1Q8IZP0 508 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 COLGALT1Q8NBJ5 622 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 RNF149Q8NC42 400 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 HELQQ8TDG4 1101 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 P2RX5Q93086 422 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 NECAB3Q96P71 396 aaPredicted RBP15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 CASD1Q96PB1 797 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 TMEM117Q9H0C3 514 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 LMAN2LQ9H0V9 348 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 CWH43Q9H720 699 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 ANKEF1Q9NU02 776 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 DACT1Q9NYF0 836 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 KIF3AQ9Y496 699 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 PCDHB6Q9Y5E3 794 aa15.3■□□□□ 0.04
RPRD1A-206ENST00000588459 A0A0U1RQF3 1178 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 HOXA2O43364 376 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 USO1O60763 962 aaKnown RBP15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 DGAT1O75907 488 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 BMP1P13497 986 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 KCNA5P22460 613 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 PHKA2P46019 1235 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 TOB1P50616 345 aaPredicted RBP15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 CAMK1Q14012 370 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 NAALADL2Q58DX5 795 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 POTEGQ6S5H5 508 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 LRRC55Q6ZSA7 311 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 CATSPER3Q86XQ3 398 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 C4orf32Q8N8J7 132 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 SPPL3Q8TCT6 385 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 ASAP3Q8TDY4 903 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 POF1BQ8WVV4 589 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 LPPQ93052 612 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 UHRF1Q96T88 793 aaPredicted RBP15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 TUFT1Q9NNX1 390 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 CHST12Q9NRB3 414 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 PCDHB12Q9Y5F1 795 aa15.29■□□□□ 0.04
RPRD1A-206ENST00000588459 BDP1A6H8Y1 2624 aa15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 GTF2F1P35269 517 aaKnown RBP eCLIP15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 IRS1P35568 1242 aa15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 PBX3P40426 434 aa15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 MCM2P49736 904 aa15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 MAEAQ7L5Y9 396 aa15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 SRGAP1Q7Z6B7 1085 aa15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 THNSL1Q8IYQ7 743 aa15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 LRRC43Q8N309 656 aa15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 ERMNQ8TAM6 284 aa15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 POLR3CQ9BUI4 534 aaPredicted RBP15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 POLR3FQ9H1D9 316 aaPredicted RBP15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 AAASQ9NRG9 546 aa15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 AGPAT5Q9NUQ2 364 aa15.28■□□□□ 0.04
RPRD1A-206ENST00000588459 SMC3Q9UQE7 1217 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms