RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 ALG13Q9NP73 1137 aaKnown RBP21.81■■□□□ 1.08
TPM4-208ENST00000588410 PLAGL2Q9UPG8 496 aa21.81■■□□□ 1.08
TPM4-208ENST00000588410 PIN4Q9Y237 131 aaKnown RBP21.81■■□□□ 1.08
TPM4-208ENST00000588410 UNC80Q8N2C7 3258 aa21.81■■□□□ 1.08
TPM4-208ENST00000588410 A0A0U1RQF3 1178 aa21.8■■□□□ 1.08
TPM4-208ENST00000588410 CSPG5O95196 566 aa21.8■■□□□ 1.08
TPM4-208ENST00000588410 TECP42680 631 aa21.8■■□□□ 1.08
TPM4-208ENST00000588410 KCNQ1P51787 676 aa21.8■■□□□ 1.08
TPM4-208ENST00000588410 LAMTOR4Q0VGL1 99 aa21.8■■□□□ 1.08
TPM4-208ENST00000588410 TCEAL5Q5H9L2 206 aa21.8■■□□□ 1.08
TPM4-208ENST00000588410 TWF2Q6IBS0 349 aaKnown RBP21.8■■□□□ 1.08
TPM4-208ENST00000588410 KLHL23Q8NBE8 558 aa21.8■■□□□ 1.08
TPM4-208ENST00000588410 UBE2ZQ9H832 354 aaPredicted RBP21.8■■□□□ 1.08
TPM4-208ENST00000588410 TYW1Q9NV66 732 aaKnown RBP21.8■■□□□ 1.08
TPM4-208ENST00000588410 MYH9P35579 1960 aaKnown RBP21.79■■□□□ 1.08
TPM4-208ENST00000588410 COL4A4P53420 1690 aaPredicted RBP21.79■■□□□ 1.08
TPM4-208ENST00000588410 DGAT1O75907 488 aa21.79■■□□□ 1.08
TPM4-208ENST00000588410 EOMESO95936 686 aa21.79■■□□□ 1.08
TPM4-208ENST00000588410 U2AF2P26368 475 aaKnown RBP eCLIP21.79■■□□□ 1.083e-8■□□□□ 9.8
TPM4-208ENST00000588410 MCTP1Q6DN14 999 aa21.79■■□□□ 1.08
TPM4-208ENST00000588410 SRGAP1Q7Z6B7 1085 aa21.79■■□□□ 1.08
TPM4-208ENST00000588410 FERMT3Q86UX7 667 aa21.79■■□□□ 1.08
TPM4-208ENST00000588410 PIGOQ8TEQ8 1089 aa21.79■■□□□ 1.08
TPM4-208ENST00000588410 IFT122Q9HBG6 1241 aa21.79■■□□□ 1.08
TPM4-208ENST00000588410 TUFT1Q9NNX1 390 aa21.79■■□□□ 1.08
TPM4-208ENST00000588410 A0A0C4DFX4 3053 aa21.79■■□□□ 1.08
TPM4-208ENST00000588410 PRRC2BQ5JSZ5 2229 aaKnown RBP21.79■■□□□ 1.08
TPM4-208ENST00000588410 TTC3P53804 2025 aa21.79■■□□□ 1.08
TPM4-208ENST00000588410 ITGB1P05556 798 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 SKIP12755 728 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 XRCC6P12956 609 aaKnown RBP eCLIP21.78■■□□□ 1.08
TPM4-208ENST00000588410 BMP1P13497 986 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 LAG3P18627 525 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 PHKA2P46019 1235 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 TFDP1Q14186 410 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 MXD4Q14582 209 aaPredicted RBP21.78■■□□□ 1.08
TPM4-208ENST00000588410 CSPP1Q1MSJ5 1256 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 EP400NLQ6ZTU2 488 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 THNSL1Q8IYQ7 743 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 LRRC43Q8N309 656 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 RNF149Q8NC42 400 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 CASD1Q96PB1 797 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 UHRF1Q96T88 793 aaPredicted RBP21.78■■□□□ 1.08
TPM4-208ENST00000588410 PRUNE2Q8WUY3 3088 aa21.78■■□□□ 1.08
TPM4-208ENST00000588410 H3BQV1 296 aa21.77■■□□□ 1.08
TPM4-208ENST00000588410 NCK2O43639 380 aa21.77■■□□□ 1.08
TPM4-208ENST00000588410 CD2BP2O95400 341 aaKnown RBP21.77■■□□□ 1.08
TPM4-208ENST00000588410 KCNA5P22460 613 aa21.77■■□□□ 1.08
TPM4-208ENST00000588410 RARRES1P49788 294 aa21.77■■□□□ 1.08
TPM4-208ENST00000588410 RAB27AP51159 221 aa21.77■■□□□ 1.08
TPM4-208ENST00000588410 CATSPER3Q86XQ3 398 aa21.77■■□□□ 1.08
TPM4-208ENST00000588410 SPPL3Q8TCT6 385 aa21.77■■□□□ 1.08
TPM4-208ENST00000588410 PPP2R3CQ969Q6 453 aa21.77■■□□□ 1.08
TPM4-208ENST00000588410 NACC1Q96RE7 527 aa21.77■■□□□ 1.08
TPM4-208ENST00000588410 POLR3CQ9BUI4 534 aaPredicted RBP21.77■■□□□ 1.08
TPM4-208ENST00000588410 XPNPEP1Q9NQW7 623 aa21.77■■□□□ 1.08
TPM4-208ENST00000588410 SMC3Q9UQE7 1217 aa21.77■■□□□ 1.08
TPM4-208ENST00000588410 A0A087WWV3 80 aa21.76■■□□□ 1.07
TPM4-208ENST00000588410 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.76■■□□□ 1.07
TPM4-208ENST00000588410 SPATA31C1P0DKV0 1188 aa21.76■■□□□ 1.07
TPM4-208ENST00000588410 GJB2P29033 226 aa21.76■■□□□ 1.07
TPM4-208ENST00000588410 NBR1Q14596 966 aa21.76■■□□□ 1.07
TPM4-208ENST00000588410 HAUS3Q68CZ6 603 aa21.76■■□□□ 1.07
TPM4-208ENST00000588410 ZNF598Q86UK7 904 aaKnown RBP21.76■■□□□ 1.07
TPM4-208ENST00000588410 COLGALT1Q8NBJ5 622 aa21.76■■□□□ 1.07
TPM4-208ENST00000588410 POF1BQ8WVV4 589 aa21.76■■□□□ 1.07
TPM4-208ENST00000588410 TRAIPQ9BWF2 469 aa21.76■■□□□ 1.07
TPM4-208ENST00000588410 RNF19AQ9NV58 838 aa21.76■■□□□ 1.07
TPM4-208ENST00000588410 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.76■■□□□ 1.07
TPM4-208ENST00000588410 USO1O60763 962 aaKnown RBP21.75■■□□□ 1.07
TPM4-208ENST00000588410 MED24O75448 989 aa21.75■■□□□ 1.07
TPM4-208ENST00000588410 ERLIN2O94905 339 aa21.75■■□□□ 1.07
TPM4-208ENST00000588410 NCBP1Q09161 790 aaKnown RBP21.75■■□□□ 1.07
TPM4-208ENST00000588410 CLLU1OSQ5K130 101 aa21.75■■□□□ 1.07
TPM4-208ENST00000588410 HELQQ8TDG4 1101 aa21.75■■□□□ 1.07
TPM4-208ENST00000588410 MICAL1Q8TDZ2 1067 aa21.75■■□□□ 1.07
TPM4-208ENST00000588410 PABPC5Q96DU9 382 aaKnown RBP21.75■■□□□ 1.07
TPM4-208ENST00000588410 MRPL9Q9BYD2 267 aaKnown RBP21.75■■□□□ 1.07
TPM4-208ENST00000588410 RAB34Q9BZG1 259 aa21.75■■□□□ 1.07
TPM4-208ENST00000588410 CWH43Q9H720 699 aa21.75■■□□□ 1.07
TPM4-208ENST00000588410 AGPAT5Q9NUQ2 364 aa21.75■■□□□ 1.07
TPM4-208ENST00000588410 FAM105AQ9NUU6 356 aa21.75■■□□□ 1.07
TPM4-208ENST00000588410 HCSTQ9UBK5 93 aa21.75■■□□□ 1.07
TPM4-208ENST00000588410 TNFRSF10AO00220 468 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 FGF18O76093 207 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 RPA1P27694 616 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 FXR2P51116 673 aaKnown RBP eCLIP21.74■■□□□ 1.072e-7■□□□□ 10.7
TPM4-208ENST00000588410 UBE3AQ05086 875 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 LEXMQ3ZCV2 418 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 PGBD4Q96DM1 585 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 ZNF558Q96NG5 402 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 IGFLR1Q9H665 355 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 MINDY3Q9H8M7 445 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 CLDND1Q9NY35 253 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 LRWD1Q9UFC0 647 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 DBR1Q9UK59 544 aaKnown RBP21.74■■□□□ 1.07
TPM4-208ENST00000588410 PCDHB6Q9Y5E3 794 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 STK24Q9Y6E0 443 aa21.74■■□□□ 1.07
TPM4-208ENST00000588410 EVPLQ92817 2033 aa21.73■■□□□ 1.07
TPM4-208ENST00000588410 INO80B-WBP1J3KQ70 363 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms