RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 SYT11Q9BT88 431 aa18.3■□□□□ 0.52
PRKCSH-205ENST00000587327 CELF4Q9BZC1 486 aaKnown RBP18.3■□□□□ 0.52
PRKCSH-205ENST00000587327 TUFT1Q9NNX1 390 aa18.3■□□□□ 0.52
PRKCSH-205ENST00000587327 FAM114A2Q9NRY5 505 aa18.3■□□□□ 0.52
PRKCSH-205ENST00000587327 DNAJC12Q9UKB3 198 aa18.3■□□□□ 0.52
PRKCSH-205ENST00000587327 PPP1R9AQ9ULJ8 1098 aa18.3■□□□□ 0.52
PRKCSH-205ENST00000587327 PIK3CDO00329 1044 aa18.3■□□□□ 0.52
PRKCSH-205ENST00000587327 PPATQ06203 517 aa18.3■□□□□ 0.52
PRKCSH-205ENST00000587327 TPH2Q8IWU9 490 aa18.3■□□□□ 0.52
PRKCSH-205ENST00000587327 GPR88Q9GZN0 384 aa18.3■□□□□ 0.52
PRKCSH-205ENST00000587327 PARVGQ9HBI0 331 aa18.3■□□□□ 0.52
PRKCSH-205ENST00000587327 DIS3Q9Y2L1 958 aaKnown RBP18.3■□□□□ 0.52
PRKCSH-205ENST00000587327 DDX3YO15523 660 aaKnown RBP18.29■□□□□ 0.52
PRKCSH-205ENST00000587327 FSBPO95073 299 aa18.29■□□□□ 0.52
PRKCSH-205ENST00000587327 BMP3P12645 472 aa18.29■□□□□ 0.52
PRKCSH-205ENST00000587327 FNTAP49354 379 aa18.29■□□□□ 0.52
PRKCSH-205ENST00000587327 KCTD19Q17RG1 926 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-205ENST00000587327 AGBL2Q5U5Z8 902 aa18.29■□□□□ 0.52
PRKCSH-205ENST00000587327 FBXW10Q5XX13 1052 aa18.29■□□□□ 0.52
PRKCSH-205ENST00000587327 CTNNBL1Q8WYA6 563 aaPredicted RBP18.29■□□□□ 0.52
PRKCSH-205ENST00000587327 PPANQ9NQ55 473 aaKnown RBP18.29■□□□□ 0.52
PRKCSH-205ENST00000587327 DHX9Q08211 1270 aaKnown RBP18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 COG2Q14746 738 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 CBWD6Q4V339 395 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 CBWD3Q5JTY5 395 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 CBWD5Q5RIA9 395 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 DCAF12L1Q5VU92 463 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 BTNL9Q6UXG8 535 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 ZNF720Q7Z2F6 126 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 FIZ1Q96SL8 496 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 NR2E1Q9Y466 385 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 CAPN7Q9Y6W3 813 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 FRMPD4Q14CM0 1322 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 A0A1W2PRG0 241 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 GMNCA6NCL1 334 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 SPDYE2BA6NHP3 402 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 ZBTB39O15060 712 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 CCDC172P0C7W6 258 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 SPDYE6P0CI01 402 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 ABCB4P21439 1286 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 PTENP60484 403 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 PLS1Q14651 629 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 ODF2Q5BJF6 829 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 RBM26Q5T8P6 1007 aaKnown RBP18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 FMNL3Q8IVF7 1028 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 KSR1Q8IVT5 923 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 PRPF38AQ8NAV1 312 aaKnown RBP18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 DYDC2Q96IM9 177 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 CARD9Q9H257 536 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 DMAC2Q9NW81 257 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 BCCIPQ9P287 314 aaKnown RBP eCLIP18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 SEL1LQ9UBV2 794 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 RGS17Q9UGC6 210 aaPredicted RBP18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 FRMD4BQ9Y2L6 1034 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 IGSF9BQ9UPX0 1349 aa18.28■□□□□ 0.52
PRKCSH-205ENST00000587327 TRAPPC3O43617 180 aa18.27■□□□□ 0.52
PRKCSH-205ENST00000587327 PSMD10O75832 226 aa18.27■□□□□ 0.52
PRKCSH-205ENST00000587327 HNRNPH1P31943 449 aaKnown RBP18.27■□□□□ 0.52
PRKCSH-205ENST00000587327 RSBN1LQ6PCB5 846 aaPredicted RBP18.27■□□□□ 0.52
PRKCSH-205ENST00000587327 HS2ST1Q7LGA3 356 aa18.27■□□□□ 0.52
PRKCSH-205ENST00000587327 CNPY4Q8N129 248 aa18.27■□□□□ 0.52
PRKCSH-205ENST00000587327 C3orf20Q8ND61 904 aa18.27■□□□□ 0.52
PRKCSH-205ENST00000587327 CYFIP2Q96F07 1278 aa18.27■□□□□ 0.52
PRKCSH-205ENST00000587327 WDR18Q9BV38 432 aa18.27■□□□□ 0.52
PRKCSH-205ENST00000587327 DPH5Q9H2P9 285 aa18.27■□□□□ 0.52
PRKCSH-205ENST00000587327 AGPAT3Q9NRZ7 376 aa18.27■□□□□ 0.52
PRKCSH-205ENST00000587327 APEX2Q9UBZ4 518 aa18.27■□□□□ 0.52
PRKCSH-205ENST00000587327 CLRN2A0PK11 232 aa18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 TCP10L2B9ZVM9 353 aa18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 GTF2A1P52655 376 aaPredicted RBP18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 ZNF131P52739 623 aa18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 PPP2R2AP63151 447 aa18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 PPP2R5CQ13362 524 aa18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 PPP2R5AQ15172 486 aa18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 PPP2R5EQ16537 467 aa18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 LRCH2Q5VUJ6 765 aa18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 C6orf89Q6UWU4 347 aa18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 SLC30A10Q6XR72 485 aa18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 NAP1L3Q99457 506 aaPredicted RBP18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 INTS2Q9H0H0 1204 aaKnown RBP18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 RAB17Q9H0T7 212 aa18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 NOVA2Q9UNW9 492 aaKnown RBP18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 UBE4BO95155 1302 aa18.27■□□□□ 0.51
PRKCSH-205ENST00000587327 CHMP2AO43633 222 aa18.26■□□□□ 0.51
PRKCSH-205ENST00000587327 PPFIA2O75334 1257 aa18.26■□□□□ 0.51
PRKCSH-205ENST00000587327 RAD17O75943 681 aa18.26■□□□□ 0.51
PRKCSH-205ENST00000587327 TMOD1P28289 359 aa18.26■□□□□ 0.51
PRKCSH-205ENST00000587327 FAM178BQ8IXR5 827 aa18.26■□□□□ 0.51
PRKCSH-205ENST00000587327 ATP8B4Q8TF62 1192 aa18.26■□□□□ 0.51
PRKCSH-205ENST00000587327 GMLQ99445 158 aa18.26■□□□□ 0.51
PRKCSH-205ENST00000587327 TRIM51Q9BSJ1 452 aa18.26■□□□□ 0.51
PRKCSH-205ENST00000587327 TXLNGYQ9BZA5 131 aa18.26■□□□□ 0.51
PRKCSH-205ENST00000587327 PRR12Q9ULL5 1215 aa18.26■□□□□ 0.51
PRKCSH-205ENST00000587327 TRIM49P0CI25 452 aa18.25■□□□□ 0.51
PRKCSH-205ENST00000587327 TRIM49CP0CI26 452 aa18.25■□□□□ 0.51
PRKCSH-205ENST00000587327 TNFAIP3P21580 790 aa18.25■□□□□ 0.51
PRKCSH-205ENST00000587327 CYP2J2P51589 502 aa18.25■□□□□ 0.51
PRKCSH-205ENST00000587327 PRPF4BQ13523 1007 aaKnown RBP18.25■□□□□ 0.51
PRKCSH-205ENST00000587327 SPDYCQ5MJ68 293 aa18.25■□□□□ 0.51
PRKCSH-205ENST00000587327 KCNV1Q6PIU1 500 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms