RNA–Protein interactions for RNA: ENST00000587098.1

CCDC130-207, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 617 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-207ENST00000587098 PCDHB7Q9Y5E2 793 aa16.3■□□□□ 0.2
CCDC130-207ENST00000587098 CLIC4Q9Y696 253 aa16.3■□□□□ 0.2
CCDC130-207ENST00000587098 CHD7Q9P2D1 2997 aa16.3■□□□□ 0.2
CCDC130-207ENST00000587098 CDH23Q9H251 3354 aa16.29■□□□□ 0.2
CCDC130-207ENST00000587098 ARHGEF35A5YM69 484 aa16.29■□□□□ 0.2
CCDC130-207ENST00000587098 BMP15O95972 392 aa16.29■□□□□ 0.2
CCDC130-207ENST00000587098 HSP90AA1P07900 732 aaKnown RBP16.29■□□□□ 0.2
CCDC130-207ENST00000587098 MXD4Q14582 209 aaPredicted RBP16.29■□□□□ 0.2
CCDC130-207ENST00000587098 PADI6Q6TGC4 694 aa16.29■□□□□ 0.2
CCDC130-207ENST00000587098 SRGAP1Q7Z6B7 1085 aa16.29■□□□□ 0.2
CCDC130-207ENST00000587098 C17orf80Q9BSJ5 609 aa16.29■□□□□ 0.2
CCDC130-207ENST00000587098 MINDY3Q9H8M7 445 aa16.29■□□□□ 0.2
CCDC130-207ENST00000587098 RC3H2Q9HBD1 1191 aaKnown RBP16.29■□□□□ 0.2
CCDC130-207ENST00000587098 GPRC5CQ9NQ84 441 aa16.29■□□□□ 0.2
CCDC130-207ENST00000587098 MTUS1Q9ULD2 1270 aa16.29■□□□□ 0.2
CCDC130-207ENST00000587098 LRFN2Q9ULH4 789 aa16.29■□□□□ 0.2
CCDC130-207ENST00000587098 E9PMD0 336 aa16.28■□□□□ 0.2
CCDC130-207ENST00000587098 CYP11B2P19099 503 aa16.28■□□□□ 0.2
CCDC130-207ENST00000587098 SFPQP23246 707 aaKnown RBP eCLIP16.28■□□□□ 0.2
CCDC130-207ENST00000587098 GLRA2P23416 452 aa16.28■□□□□ 0.2
CCDC130-207ENST00000587098 GATMP50440 423 aa16.28■□□□□ 0.2
CCDC130-207ENST00000587098 CATSPER4Q7RTX7 472 aa16.28■□□□□ 0.2
CCDC130-207ENST00000587098 FIBCD1Q8N539 461 aa16.28■□□□□ 0.2
CCDC130-207ENST00000587098 POLR3FQ9H1D9 316 aaPredicted RBP16.28■□□□□ 0.2
CCDC130-207ENST00000587098 BHMT2Q9H2M3 363 aa16.28■□□□□ 0.2
CCDC130-207ENST00000587098 ZSCAN16Q9H4T2 348 aaPredicted RBP16.28■□□□□ 0.2
CCDC130-207ENST00000587098 CHST12Q9NRB3 414 aa16.28■□□□□ 0.2
CCDC130-207ENST00000587098 DNM3Q9UQ16 869 aa16.28■□□□□ 0.2
CCDC130-207ENST00000587098 IGFBP4P22692 258 aa16.27■□□□□ 0.2
CCDC130-207ENST00000587098 PTENP60484 403 aa16.27■□□□□ 0.2
CCDC130-207ENST00000587098 GRIN1Q05586 938 aa16.27■□□□□ 0.2
CCDC130-207ENST00000587098 POU5F1BQ06416 359 aa16.27■□□□□ 0.2
CCDC130-207ENST00000587098 CAPSQ13938 189 aa16.27■□□□□ 0.2
CCDC130-207ENST00000587098 BTG3Q14201 252 aaPredicted RBP16.27■□□□□ 0.2
CCDC130-207ENST00000587098 PTPAQ15257 358 aa16.27■□□□□ 0.2
CCDC130-207ENST00000587098 ZRSR1Q15695 479 aaKnown RBP16.27■□□□□ 0.2
CCDC130-207ENST00000587098 HYIQ5T013 277 aa16.27■□□□□ 0.2
CCDC130-207ENST00000587098 FAM102BQ5T8I3 360 aa16.27■□□□□ 0.2
CCDC130-207ENST00000587098 KCNK18Q7Z418 384 aa16.27■□□□□ 0.2
CCDC130-207ENST00000587098 MCPH1Q8NEM0 835 aa16.27■□□□□ 0.2
CCDC130-207ENST00000587098 PNMA5Q96PV4 448 aa16.27■□□□□ 0.2
CCDC130-207ENST00000587098 ELAC1Q9H777 363 aaKnown RBP16.27■□□□□ 0.2
CCDC130-207ENST00000587098 POLD4Q9HCU8 107 aa16.27■□□□□ 0.2
CCDC130-207ENST00000587098 COL6A3P12111 3177 aa16.27■□□□□ 0.19
CCDC130-207ENST00000587098 ADGRA3Q8IWK6 1321 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 LPXNO60711 386 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 EYA4O95677 639 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 LINC00271P0C7V0 271 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 PHKA2P46019 1235 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 CEBPZQ03701 1054 aaKnown RBP16.26■□□□□ 0.19
CCDC130-207ENST00000587098 GRB10Q13322 594 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 TFDP1Q14186 410 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 PAN2Q504Q3 1202 aaKnown RBP16.26■□□□□ 0.19
CCDC130-207ENST00000587098 EPC2Q52LR7 807 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 FOXD4L5Q5VV16 416 aaPredicted RBP16.26■□□□□ 0.19
CCDC130-207ENST00000587098 ECHDC2Q86YB7 292 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 IFNLR1Q8IU57 520 aaPredicted RBP16.26■□□□□ 0.19
CCDC130-207ENST00000587098 TMEM192Q8IY95 271 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 CMTR2Q8IYT2 770 aaKnown RBP16.26■□□□□ 0.19
CCDC130-207ENST00000587098 MAFAQ8NHW3 353 aaPredicted RBP16.26■□□□□ 0.19
CCDC130-207ENST00000587098 FOXD4L4Q8WXT5 416 aaPredicted RBP16.26■□□□□ 0.19
CCDC130-207ENST00000587098 AK8Q96MA6 479 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 USP28Q96RU2 1077 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 PLIN2Q99541 437 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
CCDC130-207ENST00000587098 TMEM161AQ9NX61 479 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 DACT1Q9NYF0 836 aa16.26■□□□□ 0.19
CCDC130-207ENST00000587098 A0A0U1RQF3 1178 aa16.25■□□□□ 0.19
CCDC130-207ENST00000587098 MARCKSP29966 332 aaPredicted RBP16.25■□□□□ 0.19
CCDC130-207ENST00000587098 HOXA11P31270 313 aaPredicted RBP16.25■□□□□ 0.19
CCDC130-207ENST00000587098 CABP7Q86V35 215 aa16.25■□□□□ 0.19
CCDC130-207ENST00000587098 GDPD5Q8WTR4 605 aa16.25■□□□□ 0.19
CCDC130-207ENST00000587098 SAMD11Q96NU1 681 aa16.25■□□□□ 0.19
CCDC130-207ENST00000587098 RNF19AQ9NV58 838 aa16.25■□□□□ 0.19
CCDC130-207ENST00000587098 PIN4Q9Y237 131 aaKnown RBP16.25■□□□□ 0.19
CCDC130-207ENST00000587098 PRRC2BQ5JSZ5 2229 aaKnown RBP16.25■□□□□ 0.19
CCDC130-207ENST00000587098 COL4A6Q14031 1691 aa16.24■□□□□ 0.19
CCDC130-207ENST00000587098 TBKBP1A7MCY6 615 aa16.24■□□□□ 0.19
CCDC130-207ENST00000587098 INO80B-WBP1J3KQ70 363 aa16.24■□□□□ 0.19
CCDC130-207ENST00000587098 FGFR1P11362 822 aa16.24■□□□□ 0.19
CCDC130-207ENST00000587098 POU3F3P20264 500 aaPredicted RBP16.24■□□□□ 0.19
CCDC130-207ENST00000587098 LONP1P36776 959 aaKnown RBP16.24■□□□□ 0.19
CCDC130-207ENST00000587098 BMPR1AP36894 532 aa16.24■□□□□ 0.19
CCDC130-207ENST00000587098 TWF2Q6IBS0 349 aaKnown RBP16.24■□□□□ 0.19
CCDC130-207ENST00000587098 ZNF598Q86UK7 904 aaKnown RBP16.24■□□□□ 0.19
CCDC130-207ENST00000587098 FBXO22Q8NEZ5 403 aa16.24■□□□□ 0.19
CCDC130-207ENST00000587098 BSNDQ8WZ55 320 aa16.24■□□□□ 0.19
CCDC130-207ENST00000587098 CLP1Q92989 425 aaKnown RBP16.24■□□□□ 0.19
CCDC130-207ENST00000587098 TRAIPQ9BWF2 469 aa16.24■□□□□ 0.19
CCDC130-207ENST00000587098 NFKBIZQ9BYH8 718 aa16.24■□□□□ 0.19
CCDC130-207ENST00000587098 AGPAT5Q9NUQ2 364 aa16.24■□□□□ 0.19
CCDC130-207ENST00000587098 MTCH2Q9Y6C9 303 aa16.24■□□□□ 0.19
CCDC130-207ENST00000587098 MRPL42Q9Y6G3 142 aaKnown RBP16.24■□□□□ 0.19
CCDC130-207ENST00000587098 LRRIQ4A6NIV6 560 aa16.23■□□□□ 0.19
CCDC130-207ENST00000587098 EOMESO95936 686 aa16.23■□□□□ 0.19
CCDC130-207ENST00000587098 PDIA4P13667 645 aaKnown RBP16.23■□□□□ 0.19
CCDC130-207ENST00000587098 ATF7P17544 494 aaPredicted RBP16.23■□□□□ 0.19
CCDC130-207ENST00000587098 UBA7P41226 1012 aa16.23■□□□□ 0.19
CCDC130-207ENST00000587098 MBTD1Q05BQ5 628 aa16.23■□□□□ 0.19
CCDC130-207ENST00000587098 PKP1Q13835 747 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms