RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 FOXN3O00409 490 aaPredicted RBP12.88□□□□□ -0.35
ERBB2-218ENST00000584450 THAP12O43422 761 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 GAS8O95995 478 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 GLI1P08151 1106 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 YWHABP31946 246 aaKnown RBP12.88□□□□□ -0.35
ERBB2-218ENST00000584450 ACOT2P49753 483 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 EDRF1Q3B7T1 1238 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 THNSL1Q8IYQ7 743 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 RTKN2Q8IZC4 609 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 MSANTD4Q8NCY6 345 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 ARL8AQ96BM9 186 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 DNAJC19Q96DA6 116 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 TAAR1Q96RJ0 339 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 UNC45AQ9H3U1 944 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 RPAP3Q9H6T3 665 aaPredicted RBP12.88□□□□□ -0.35
ERBB2-218ENST00000584450 CNOT8Q9UFF9 292 aaKnown RBP12.88□□□□□ -0.35
ERBB2-218ENST00000584450 FBXL5Q9UKA1 691 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 BAZ2AQ9UIF9 1905 aaKnown RBP12.88□□□□□ -0.35
ERBB2-218ENST00000584450 CTNND1O60716 968 aaKnown RBP12.88□□□□□ -0.35
ERBB2-218ENST00000584450 KRT15P19012 456 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
ERBB2-218ENST00000584450 MTM1Q13496 603 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 MTMR3Q13615 1198 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 NAB2Q15742 525 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 BRDTQ58F21 947 aaPredicted RBP12.88□□□□□ -0.35
ERBB2-218ENST00000584450 DCAF15Q66K64 600 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 LRRC15Q8TF66 581 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 BTBD6Q96KE9 485 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 FAM84AQ96KN4 292 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 ZIM3Q96PE6 472 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 C11orf70Q9BRQ4 267 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 VPS37BQ9H9H4 285 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 KCND1Q9NSA2 647 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 SERPINA10Q9UK55 444 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 PRDM4Q9UKN5 801 aa12.88□□□□□ -0.35
ERBB2-218ENST00000584450 MEIS2O14770 477 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 ZNF263O14978 683 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 DKC1O60832 514 aaKnown RBP eCLIP12.87□□□□□ -0.35
ERBB2-218ENST00000584450 RPS6P62753 249 aaKnown RBP12.87□□□□□ -0.35
ERBB2-218ENST00000584450 KCNMA1Q12791 1236 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 CCDC38Q502W7 563 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 SEZ6Q53EL9 994 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 C1orf54Q8WWF1 131 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 THOC1Q96FV9 657 aaKnown RBP12.87□□□□□ -0.35
ERBB2-218ENST00000584450 RNPC3Q96LT9 517 aaKnown RBP12.87□□□□□ -0.35
ERBB2-218ENST00000584450 PURBQ96QR8 312 aaKnown RBP12.87□□□□□ -0.35
ERBB2-218ENST00000584450 TLR10Q9BXR5 811 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 EDEM3Q9BZQ6 932 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 EHD4Q9H223 541 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 ACP6Q9NPH0 428 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 FEM1BQ9UK73 627 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 SIK3Q9Y2K2 1263 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 GAKO14976 1311 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 POC1B-GALNT4F8VUJ3 575 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 GTF2A1P52655 376 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-218ENST00000584450 SEC24CP53992 1094 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 LRRC55Q6ZSA7 311 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.352e-6■■■■□ 21.9
ERBB2-218ENST00000584450 PODXL2Q9NZ53 605 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 HOXA10P31260 410 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-218ENST00000584450 MAGOHP61326 146 aaKnown RBP12.87□□□□□ -0.35
ERBB2-218ENST00000584450 DACT2Q5SW24 774 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 RSBN1LQ6PCB5 846 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-218ENST00000584450 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.87□□□□□ -0.35
ERBB2-218ENST00000584450 TMEM143Q96AN5 459 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 NLRP4Q96MN2 994 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 AGPAT3Q9NRZ7 376 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 NKIRAS1Q9NYS0 192 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 SPATA31A6Q5VVP1 1343 aa12.87□□□□□ -0.35
ERBB2-218ENST00000584450 WDR64B1ANS9 1081 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 PPFIA4O75335 1185 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 ENTPD3O75355 529 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 ITGA4P13612 1032 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 DPEP1P16444 411 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 SREBF1P36956 1147 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 BFSP1Q12934 665 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 ALS2CLQ60I27 953 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 SCYL2Q6P3W7 929 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 FOXR1Q6PIV2 292 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 FAM151AQ8WW52 585 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 PPM1EQ8WY54 764 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 ZKSCAN4Q969J2 545 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-218ENST00000584450 THAP2Q9H0W7 228 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 HSPBP1Q9NZL4 362 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 ATP2A1O14983 1001 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 SEMA3FQ13275 785 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 C10orf76Q5T2E6 689 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 TMEM270Q6UE05 265 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 CDR2LQ86X02 465 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-218ENST00000584450 WHAMMQ8TF30 809 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-218ENST00000584450 NUP85Q9BW27 656 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 TAF1DQ9H5J8 278 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-218ENST00000584450 KLHL11Q9NVR0 708 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 TTC7AQ9ULT0 858 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-218ENST00000584450 ZNF233A6NK53 670 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 DESP17661 470 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 GPC5P78333 572 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 MEA1Q16626 185 aa12.86□□□□□ -0.35
ERBB2-218ENST00000584450 TMEM119Q4V9L6 283 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms