RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ADGRA3Q8IWK6 1321 aa14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 IGFBP4P22692 258 aa14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 PHKA2P46019 1235 aa14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 MXD4Q14582 209 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 FAM173BQ6P4H8 233 aa14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 SLC24A5Q71RS6 500 aa14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 CATSPER4Q7RTX7 472 aa14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 RNF149Q8NC42 400 aa14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 TGS1Q96RS0 853 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 POLR3FQ9H1D9 316 aaPredicted RBP14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 BHMT2Q9H2M3 363 aa14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 PCDHB7Q9Y5E2 793 aa14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 TTC3P53804 2025 aa14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 CHD9Q3L8U1 2897 aa14.01□□□□□ -0.17
SMARCE1-218ENST00000582955 C9IYK1 514 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 RFXAPO00287 272 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 DGKIO75912 1065 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 TFDP1Q14186 410 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 BTG3Q14201 252 aaPredicted RBP14□□□□□ -0.17
SMARCE1-218ENST00000582955 DSC3Q14574 896 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 FAM102BQ5T8I3 360 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 PADI6Q6TGC4 694 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 SRGAP1Q7Z6B7 1085 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 FIBCD1Q8N539 461 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 MCPH1Q8NEM0 835 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 ASAP3Q8TDY4 903 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 CDK5RAP3Q96JB5 506 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 C17orf80Q9BSJ5 609 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 ZSCAN16Q9H4T2 348 aaPredicted RBP14□□□□□ -0.17
SMARCE1-218ENST00000582955 IFT122Q9HBG6 1241 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 GPRC5CQ9NQ84 441 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 DNM3Q9UQ16 869 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 PIN4Q9Y237 131 aaKnown RBP14□□□□□ -0.17
SMARCE1-218ENST00000582955 CLIC4Q9Y696 253 aa14□□□□□ -0.17
SMARCE1-218ENST00000582955 MYO9BQ13459 2157 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 EPOPA6NHQ4 379 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 E9PMD0 336 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 GLRA2P23416 452 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 ARL2P36404 184 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 GATMP50440 423 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 ERVK-21P61565 698 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 CEBPZQ03701 1054 aaKnown RBP13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 CAPSQ13938 189 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 ADGRE1Q14246 886 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 PAN2Q504Q3 1202 aaKnown RBP13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 FOXD4L5Q5VV16 416 aaPredicted RBP13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 TWF2Q6IBS0 349 aaKnown RBP13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 RNF169Q8NCN4 708 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 MAFAQ8NHW3 353 aaPredicted RBP13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 FOXD4L4Q8WXT5 416 aaPredicted RBP13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 AK8Q96MA6 479 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 PLIN2Q99541 437 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 MMTAG2Q9BU76 263 aaKnown RBP13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 DACT1Q9NYF0 836 aa13.99□□□□□ -0.17
SMARCE1-218ENST00000582955 COL4A6Q14031 1691 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 LRRIQ4A6NIV6 560 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 ERLIN2O94905 339 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 EYA4O95677 639 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 CYP11B2P19099 503 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 UBA7P41226 1012 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 CABP7Q86V35 215 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 CMTR2Q8IYT2 770 aaKnown RBP13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 CRIPAKQ8N1N5 446 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 FBXO22Q8NEZ5 403 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 RASSF8Q8NHQ8 419 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 GDPD5Q8WTR4 605 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 ZNF689Q96CS4 500 aaPredicted RBP13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 SAMD11Q96NU1 681 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 NT5C3AQ9H0P0 336 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 MINDY3Q9H8M7 445 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 RC3H2Q9HBD1 1191 aaKnown RBP13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 CHST12Q9NRB3 414 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 TMEM161AQ9NX61 479 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 CHD7Q9P2D1 2997 aa13.98□□□□□ -0.17
SMARCE1-218ENST00000582955 INO80B-WBP1J3KQ70 363 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 GTPBP6O43824 516 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 SSBP05455 408 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 FGFR1P11362 822 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 MARCKSP29966 332 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 CTNNB1P35222 781 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 LONP1P36776 959 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 PTENP60484 403 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 FAM189BP81408 668 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 GRIN1Q05586 938 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 GRB10Q13322 594 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 PTPAQ15257 358 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 EPC2Q52LR7 807 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 KCNK18Q7Z418 384 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 ECHDC2Q86YB7 292 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 TMEM192Q8IY95 271 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 MICALL1Q8N3F8 863 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 PPM1EQ8WY54 764 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 CALML4Q96GE6 196 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 PNMA5Q96PV4 448 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 USP28Q96RU2 1077 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 ELAC1Q9H777 363 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 AGPAT5Q9NUQ2 364 aa13.97□□□□□ -0.17
SMARCE1-218ENST00000582955 COL4A4P53420 1690 aaPredicted RBP13.96□□□□□ -0.17
SMARCE1-218ENST00000582955 A0A0U1RQF3 1178 aa13.96□□□□□ -0.17
SMARCE1-218ENST00000582955 TBKBP1A7MCY6 615 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms