RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 DNM2P50570 870 aa14.03□□□□□ -0.16
CBX1-206ENST00000581003 PTGDRQ13258 359 aa14.03□□□□□ -0.16
CBX1-206ENST00000581003 TCEAL5Q5H9L2 206 aa14.03□□□□□ -0.16
CBX1-206ENST00000581003 FERMT3Q86UX7 667 aa14.03□□□□□ -0.16
CBX1-206ENST00000581003 ECHDC2Q86YB7 292 aa14.03□□□□□ -0.16
CBX1-206ENST00000581003 PSPC1Q8WXF1 523 aaKnown RBP14.03□□□□□ -0.16
CBX1-206ENST00000581003 MRPL38Q96DV4 380 aaKnown RBP14.03□□□□□ -0.16
CBX1-206ENST00000581003 NECAB3Q96P71 396 aaPredicted RBP14.03□□□□□ -0.16
CBX1-206ENST00000581003 CASD1Q96PB1 797 aa14.03□□□□□ -0.16
CBX1-206ENST00000581003 MTRQ99707 1265 aa14.03□□□□□ -0.16
CBX1-206ENST00000581003 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
CBX1-206ENST00000581003 TMEM161AQ9NX61 479 aa14.03□□□□□ -0.16
CBX1-206ENST00000581003 NOL7Q9UMY1 257 aaKnown RBP14.03□□□□□ -0.16
CBX1-206ENST00000581003 SMC3Q9UQE7 1217 aa14.03□□□□□ -0.16
CBX1-206ENST00000581003 PIN4Q9Y237 131 aaKnown RBP14.03□□□□□ -0.16
CBX1-206ENST00000581003 FNDC1Q4ZHG4 1894 aaPredicted RBP14.03□□□□□ -0.16
CBX1-206ENST00000581003 DKC1O60832 514 aaKnown RBP eCLIP14.02□□□□□ -0.17
CBX1-206ENST00000581003 ITGB1P05556 798 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 GTF2F1P35269 517 aaKnown RBP eCLIP14.02□□□□□ -0.17
CBX1-206ENST00000581003 IRS1P35568 1242 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 CAPSQ13938 189 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 OTUD6AQ7L8S5 288 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 CATSPER4Q7RTX7 472 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 ZNF598Q86UK7 904 aaKnown RBP14.02□□□□□ -0.17
CBX1-206ENST00000581003 ZNF410Q86VK4 478 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 KLHL23Q8NBE8 558 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 RNF149Q8NC42 400 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 NEK9Q8TD19 979 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 HELQQ8TDG4 1101 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 SAMD11Q96NU1 681 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 ASB2Q96Q27 587 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 POLR3FQ9H1D9 316 aaPredicted RBP14.02□□□□□ -0.17
CBX1-206ENST00000581003 CWH43Q9H720 699 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 ATP6V0A4Q9HBG4 840 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.02□□□□□ -0.17
CBX1-206ENST00000581003 ANKEF1Q9NU02 776 aa14.02□□□□□ -0.17
CBX1-206ENST00000581003 TYW1Q9NV66 732 aaKnown RBP14.02□□□□□ -0.17
CBX1-206ENST00000581003 PLXNA4Q9HCM2 1894 aa14.01□□□□□ -0.17
CBX1-206ENST00000581003 H3BQV1 296 aa14.01□□□□□ -0.17
CBX1-206ENST00000581003 B4GALT3O60512 393 aa14.01□□□□□ -0.17
CBX1-206ENST00000581003 ZSCAN20P17040 1043 aaPredicted RBP14.01□□□□□ -0.17
CBX1-206ENST00000581003 SFPQP23246 707 aaKnown RBP eCLIP14.01□□□□□ -0.17
CBX1-206ENST00000581003 GLRA2P23416 452 aa14.01□□□□□ -0.17
CBX1-206ENST00000581003 ARL2P36404 184 aa14.01□□□□□ -0.17
CBX1-206ENST00000581003 TRAPPC10P48553 1259 aa14.01□□□□□ -0.17
CBX1-206ENST00000581003 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
CBX1-206ENST00000581003 AFF1P51825 1210 aaKnown RBP14.01□□□□□ -0.17
CBX1-206ENST00000581003 CUL4AQ13619 759 aa14.01□□□□□ -0.17
CBX1-206ENST00000581003 ODR4Q5SWX8 454 aa14.01□□□□□ -0.17
CBX1-206ENST00000581003 UBXN11Q5T124 520 aa14.01□□□□□ -0.17
CBX1-206ENST00000581003 BSNDQ8WZ55 320 aa14.01□□□□□ -0.17
CBX1-206ENST00000581003 PLAGL2Q9UPG8 496 aa14.01□□□□□ -0.17
CBX1-206ENST00000581003 USP20Q9Y2K6 914 aa14.01□□□□□ -0.17
CBX1-206ENST00000581003 A0A0U1RQF3 1178 aa14□□□□□ -0.17
CBX1-206ENST00000581003 B4GALT5O43286 388 aa14□□□□□ -0.17
CBX1-206ENST00000581003 TSPAN1O60635 241 aa14□□□□□ -0.17
CBX1-206ENST00000581003 HOXA11P31270 313 aaPredicted RBP14□□□□□ -0.17
CBX1-206ENST00000581003 CCT6AP40227 531 aaKnown RBP14□□□□□ -0.17
CBX1-206ENST00000581003 PHKA2P46019 1235 aa14□□□□□ -0.17
CBX1-206ENST00000581003 MCM2P49736 904 aa14□□□□□ -0.17
CBX1-206ENST00000581003 ORC2Q13416 577 aaPredicted RBP14□□□□□ -0.17
CBX1-206ENST00000581003 TJAP1Q5JTD0 557 aa14□□□□□ -0.17
CBX1-206ENST00000581003 SPOUT1Q5T280 376 aaKnown RBP14□□□□□ -0.17
CBX1-206ENST00000581003 TWF2Q6IBS0 349 aaKnown RBP14□□□□□ -0.17
CBX1-206ENST00000581003 KCNK18Q7Z418 384 aa14□□□□□ -0.17
CBX1-206ENST00000581003 ADGRD2Q7Z7M1 963 aa14□□□□□ -0.17
CBX1-206ENST00000581003 CDR2LQ86X02 465 aaPredicted RBP14□□□□□ -0.17
CBX1-206ENST00000581003 IGSF22Q8N9C0 903 aa14□□□□□ -0.17
CBX1-206ENST00000581003 SPPL3Q8TCT6 385 aa14□□□□□ -0.17
CBX1-206ENST00000581003 CPB2Q96IY4 423 aa14□□□□□ -0.17
CBX1-206ENST00000581003 CCDC43Q96MW1 224 aaKnown RBP14□□□□□ -0.17
CBX1-206ENST00000581003 JPH2Q9BR39 696 aaPredicted RBP14□□□□□ -0.17
CBX1-206ENST00000581003 MMTAG2Q9BU76 263 aaKnown RBP14□□□□□ -0.17
CBX1-206ENST00000581003 C11orf84Q9BUA3 381 aaPredicted RBP14□□□□□ -0.17
CBX1-206ENST00000581003 POLR3CQ9BUI4 534 aaPredicted RBP14□□□□□ -0.17
CBX1-206ENST00000581003 ELAC1Q9H777 363 aaKnown RBP14□□□□□ -0.17
CBX1-206ENST00000581003 TUFT1Q9NNX1 390 aa14□□□□□ -0.17
CBX1-206ENST00000581003 AGPAT5Q9NUQ2 364 aa14□□□□□ -0.17
CBX1-206ENST00000581003 LRWD1Q9UFC0 647 aa14□□□□□ -0.17
CBX1-206ENST00000581003 MYO9BQ13459 2157 aa14□□□□□ -0.17
CBX1-206ENST00000581003 MUC3AQ02505 3323 aa14□□□□□ -0.17
CBX1-206ENST00000581003 TTLL13PA6NNM8 815 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 LINC01565O15544 149 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 DGAT1O75907 488 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 EDN1P05305 212 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 RPA1P27694 616 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 MRPS5P82675 430 aaKnown RBP13.99□□□□□ -0.17
CBX1-206ENST00000581003 MBTD1Q05BQ5 628 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 HYAL1Q12794 435 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 AMHR2Q16671 573 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 LARP1BQ659C4 914 aaKnown RBP13.99□□□□□ -0.17
CBX1-206ENST00000581003 COLGALT1Q8NBJ5 622 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 SNX29Q8TEQ0 813 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 POF1BQ8WVV4 589 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 ATXN2LQ8WWM7 1075 aaKnown RBP13.99□□□□□ -0.17
CBX1-206ENST00000581003 KIFC3Q9BVG8 833 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 EIF2AQ9BY44 585 aaKnown RBP13.99□□□□□ -0.17
CBX1-206ENST00000581003 TMEM117Q9H0C3 514 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 FAM105AQ9NUU6 356 aa13.99□□□□□ -0.17
CBX1-206ENST00000581003 DDX19AQ9NUU7 478 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms