RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 ERVK-5Q9HDB9 667 aa27.76■■■□□ 2.03
CDC42EP4-205ENST00000580315 ST3GAL5Q9UNP4 418 aa27.76■■■□□ 2.03
CDC42EP4-205ENST00000580315 PIEZO1Q92508 2521 aa27.75■■■□□ 2.03
CDC42EP4-205ENST00000580315 RFC5P40937 340 aa27.75■■■□□ 2.03
CDC42EP4-205ENST00000580315 GPC3P51654 580 aa27.75■■■□□ 2.03
CDC42EP4-205ENST00000580315 POLGP54098 1239 aaPredicted RBP27.75■■■□□ 2.03
CDC42EP4-205ENST00000580315 NPEPPSP55786 919 aa27.75■■■□□ 2.03
CDC42EP4-205ENST00000580315 NLRP7Q8WX94 980 aa27.75■■■□□ 2.03
CDC42EP4-205ENST00000580315 ALG13Q9NP73 1137 aaKnown RBP27.75■■■□□ 2.03
CDC42EP4-205ENST00000580315 C5orf42Q9H799 3197 aa27.75■■■□□ 2.03
CDC42EP4-205ENST00000580315 POTEMA6NI47 508 aa27.74■■■□□ 2.03
CDC42EP4-205ENST00000580315 LYPLA2O95372 231 aa27.74■■■□□ 2.03
CDC42EP4-205ENST00000580315 CAMK1Q14012 370 aa27.74■■■□□ 2.03
CDC42EP4-205ENST00000580315 XKR9Q5GH70 373 aa27.74■■■□□ 2.03
CDC42EP4-205ENST00000580315 LARP1BQ659C4 914 aaKnown RBP27.74■■■□□ 2.03
CDC42EP4-205ENST00000580315 ERMNQ8TAM6 284 aa27.74■■■□□ 2.03
CDC42EP4-205ENST00000580315 CCDC43Q96MW1 224 aaKnown RBP27.74■■■□□ 2.03
CDC42EP4-205ENST00000580315 RNF216Q9NWF9 866 aaPredicted RBP27.74■■■□□ 2.03
CDC42EP4-205ENST00000580315 SUCLA2Q9P2R7 463 aaPredicted RBP27.74■■■□□ 2.03
CDC42EP4-205ENST00000580315 PLAGL2Q9UPG8 496 aa27.74■■■□□ 2.03
CDC42EP4-205ENST00000580315 DENND3A2RUS2 1198 aa27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 CSPG5O95196 566 aa27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 STAG3L1P0CL83 205 aa27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 EIF4BP23588 611 aaKnown RBP27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 GTF2F1P35269 517 aaKnown RBP eCLIP27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 TECP42680 631 aa27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 CUL4AQ13619 759 aa27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 SMAD2Q15796 467 aaKnown RBP27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 CLUL1Q15846 466 aa27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 CSPP1Q1MSJ5 1256 aa27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 FAM228AQ86W67 206 aa27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 TMX1Q9H3N1 280 aa27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 MRPL42Q9Y6G3 142 aaKnown RBP27.73■■■□□ 2.03
CDC42EP4-205ENST00000580315 DRP2Q13474 957 aa27.72■■■□□ 2.03
CDC42EP4-205ENST00000580315 NBR1Q14596 966 aa27.72■■■□□ 2.03
CDC42EP4-205ENST00000580315 RILPL1Q5EBL4 403 aa27.72■■■□□ 2.03
CDC42EP4-205ENST00000580315 NPAS4Q8IUM7 802 aa27.72■■■□□ 2.03
CDC42EP4-205ENST00000580315 CMTR2Q8IYT2 770 aaKnown RBP27.72■■■□□ 2.03
CDC42EP4-205ENST00000580315 P2RX5Q93086 422 aa27.72■■■□□ 2.03
CDC42EP4-205ENST00000580315 GCOM2Q9BZD3 368 aaPredicted RBP27.72■■■□□ 2.03
CDC42EP4-205ENST00000580315 IGFLR1Q9H665 355 aa27.72■■■□□ 2.03
CDC42EP4-205ENST00000580315 C1orf112Q9NSG2 853 aa27.72■■■□□ 2.03
CDC42EP4-205ENST00000580315 ANKEF1Q9NU02 776 aa27.72■■■□□ 2.03
CDC42EP4-205ENST00000580315 ATG2AQ2TAZ0 1938 aa27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 MBTPS2O43462 519 aa27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 GAS2O43903 313 aaKnown RBP27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 DARSP14868 501 aaKnown RBP27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 IRS1P35568 1242 aa27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 TOB1P50616 345 aaPredicted RBP27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 ZNF410Q86VK4 478 aa27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 RHPN2Q8IUC4 686 aa27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 ZNF579Q8NAF0 562 aaKnown RBP27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 ZNF668Q96K58 619 aaPredicted RBP27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 ADAM2Q99965 735 aa27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 DHX33Q9H6R0 707 aaKnown RBP27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 TUFT1Q9NNX1 390 aa27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 LRFN2Q9ULH4 789 aa27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 PCDHB6Q9Y5E3 794 aa27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 WDR81Q562E7 1941 aa27.71■■■□□ 2.03
CDC42EP4-205ENST00000580315 LAD1O00515 517 aa27.7■■■□□ 2.02
CDC42EP4-205ENST00000580315 LINC01565O15544 149 aa27.7■■■□□ 2.02
CDC42EP4-205ENST00000580315 TBX10O75333 385 aa27.7■■■□□ 2.02
CDC42EP4-205ENST00000580315 DNAJB1P25685 340 aa27.7■■■□□ 2.02
CDC42EP4-205ENST00000580315 NAALADL2Q58DX5 795 aa27.7■■■□□ 2.02
CDC42EP4-205ENST00000580315 TCP11Q8WWU5 503 aa27.7■■■□□ 2.02
CDC42EP4-205ENST00000580315 RAB34Q9BZG1 259 aa27.7■■■□□ 2.02
CDC42EP4-205ENST00000580315 INO80BQ9C086 356 aaPredicted RBP27.7■■■□□ 2.02
CDC42EP4-205ENST00000580315 RGS18Q9NS28 235 aa27.7■■■□□ 2.02
CDC42EP4-205ENST00000580315 TRIOO75962 3097 aa27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 ZBTB39O15060 712 aa27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 ITGB1P05556 798 aa27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 XRCC6P12956 609 aaKnown RBP eCLIP27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 ZSCAN20P17040 1043 aaPredicted RBP27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 PDCP20941 246 aa27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 SARSP49591 514 aaKnown RBP27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 FXR2P51116 673 aaKnown RBP eCLIP27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 PTGDRQ13258 359 aa27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 ADAM15Q13444 863 aa27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 EMC2Q15006 297 aa27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 SLC24A5Q71RS6 500 aa27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 C4orf32Q8N8J7 132 aa27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 SPPL3Q8TCT6 385 aa27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 PSPC1Q8WXF1 523 aaKnown RBP27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 POLR3CQ9BUI4 534 aaPredicted RBP27.69■■■□□ 2.02
CDC42EP4-205ENST00000580315 SMAD4Q13485 552 aaKnown RBP27.68■■■□□ 2.02
CDC42EP4-205ENST00000580315 PAN2Q504Q3 1202 aaKnown RBP27.68■■■□□ 2.02
CDC42EP4-205ENST00000580315 HAUS3Q68CZ6 603 aa27.68■■■□□ 2.02
CDC42EP4-205ENST00000580315 POP1Q99575 1024 aaKnown RBP27.68■■■□□ 2.02
CDC42EP4-205ENST00000580315 MTRQ99707 1265 aa27.68■■■□□ 2.02
CDC42EP4-205ENST00000580315 CD207Q9UJ71 328 aa27.68■■■□□ 2.02
CDC42EP4-205ENST00000580315 PCDHB7Q9Y5E2 793 aa27.68■■■□□ 2.02
CDC42EP4-205ENST00000580315 COL4A3BPQ9Y5P4 624 aa27.68■■■□□ 2.02
CDC42EP4-205ENST00000580315 STK24Q9Y6E0 443 aa27.68■■■□□ 2.02
CDC42EP4-205ENST00000580315 EVPLQ92817 2033 aa27.68■■■□□ 2.02
CDC42EP4-205ENST00000580315 A0A087WZ62 844 aa27.67■■■□□ 2.02
CDC42EP4-205ENST00000580315 MGEA5O60502 916 aa27.67■■■□□ 2.02
CDC42EP4-205ENST00000580315 IBSPP21815 317 aaPredicted RBP27.67■■■□□ 2.02
CDC42EP4-205ENST00000580315 SFPQP23246 707 aaKnown RBP eCLIP27.67■■■□□ 2.02
CDC42EP4-205ENST00000580315 CATSPER3Q86XQ3 398 aa27.67■■■□□ 2.02
CDC42EP4-205ENST00000580315 KLHL23Q8NBE8 558 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 229.7 ms