RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 RAB11FIP4Q86YS3 637 aa13.23□□□□□ -0.29
SNRPN-208ENST00000577565 SLC44A3Q8N4M1 653 aa13.23□□□□□ -0.29
SNRPN-208ENST00000577565 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
SNRPN-208ENST00000577565 LPPQ93052 612 aa13.23□□□□□ -0.29
SNRPN-208ENST00000577565 LZTS2Q9BRK4 669 aa13.23□□□□□ -0.29
SNRPN-208ENST00000577565 MRPL9Q9BYD2 267 aaKnown RBP13.23□□□□□ -0.29
SNRPN-208ENST00000577565 DNAJB4Q9UDY4 337 aa13.23□□□□□ -0.29
SNRPN-208ENST00000577565 MAFBQ9Y5Q3 323 aaPredicted RBP13.23□□□□□ -0.29
SNRPN-208ENST00000577565 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
SNRPN-208ENST00000577565 CACNA1GO43497 2377 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 FAM86B1E9PN63 330 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 CSDE1O75534 798 aaKnown RBP13.22□□□□□ -0.29
SNRPN-208ENST00000577565 FAM86B2P0C5J1 330 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 DARSP14868 501 aaKnown RBP13.22□□□□□ -0.29
SNRPN-208ENST00000577565 SLC11A1P49279 550 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 GPC3P51654 580 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 GIT2Q14161 759 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 LONRF3Q496Y0 759 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 WWC2Q6AWC2 1192 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 C15orf39Q6ZRI6 1047 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 HEATR3Q7Z4Q2 680 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 C1orf210Q8IVY1 113 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 CCDC82Q8N4S0 544 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 BBXQ8WY36 941 aaPredicted RBP13.22□□□□□ -0.29
SNRPN-208ENST00000577565 ANO3Q9BYT9 981 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 FOXQ1Q9C009 403 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 TBC1D13Q9NVG8 400 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 AKT3Q9Y243 479 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 USP24Q9UPU5 2620 aa13.22□□□□□ -0.29
SNRPN-208ENST00000577565 IGLV3-22A0A075B6J6 115 aa13.21□□□□□ -0.29
SNRPN-208ENST00000577565 SRFP11831 508 aa13.21□□□□□ -0.29
SNRPN-208ENST00000577565 SREBF1P36956 1147 aa13.21□□□□□ -0.29
SNRPN-208ENST00000577565 ATXN1P54253 815 aaKnown RBP13.21□□□□□ -0.29
SNRPN-208ENST00000577565 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
SNRPN-208ENST00000577565 PHLDB3Q6NSJ2 640 aa13.21□□□□□ -0.29
SNRPN-208ENST00000577565 EFCAB12Q6NXP0 572 aa13.21□□□□□ -0.29
SNRPN-208ENST00000577565 MIS18BP1Q6P0N0 1132 aa13.21□□□□□ -0.29
SNRPN-208ENST00000577565 ZC3H14Q6PJT7 736 aaKnown RBP13.21□□□□□ -0.29
SNRPN-208ENST00000577565 PPFIBP1Q86W92 1011 aa13.21□□□□□ -0.29
SNRPN-208ENST00000577565 ST13P5Q8NFI4 369 aaPredicted RBP13.21□□□□□ -0.29
SNRPN-208ENST00000577565 CMASQ8NFW8 434 aaPredicted RBP13.21□□□□□ -0.29
SNRPN-208ENST00000577565 WDR6Q9NNW5 1121 aaKnown RBP13.21□□□□□ -0.29
SNRPN-208ENST00000577565 ARHGEF3Q9NR81 526 aa13.21□□□□□ -0.29
SNRPN-208ENST00000577565 EPS15L1Q9UBC2 864 aa13.21□□□□□ -0.29
SNRPN-208ENST00000577565 CFAP47Q6ZTR5 3102 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 CLUHO75153 1309 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 CHD8Q9HCK8 2581 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 SH2B2O14492 632 aaPredicted RBP13.2□□□□□ -0.3
SNRPN-208ENST00000577565 ADAMTS3O15072 1205 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 ZNF862O60290 1169 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 SSBP05455 408 aaKnown RBP eCLIP13.2□□□□□ -0.3
SNRPN-208ENST00000577565 MYBP10242 640 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 GBP2P32456 591 aaPredicted RBP13.2□□□□□ -0.3
SNRPN-208ENST00000577565 PHKA2P46019 1235 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 GNAQP50148 359 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 NUCB1Q02818 461 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 DRP2Q13474 957 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 TMTC3Q6ZXV5 915 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 NIPA1Q7RTP0 329 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 ZNF280BQ86YH2 543 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 CKAP2LQ8IYA6 745 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 TMEM87AQ8NBN3 555 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 PJA1Q8NG27 643 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 CRYGNQ8WXF5 182 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 RIC8AQ9NPQ8 531 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 MAN1C1Q9NR34 630 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 SIT1Q9Y3P8 196 aa13.2□□□□□ -0.3
SNRPN-208ENST00000577565 MYH9P35579 1960 aaKnown RBP13.2□□□□□ -0.3
SNRPN-208ENST00000577565 CNTNAP5Q8WYK1 1306 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 PATJQ8NI35 1801 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 IPO5O00410 1097 aaKnown RBP13.19□□□□□ -0.3
SNRPN-208ENST00000577565 RFPL2O75678 378 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 IGHDP01880 384 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 GSPT1P15170 499 aaKnown RBP13.19□□□□□ -0.3
SNRPN-208ENST00000577565 TGM1P22735 817 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 KLRC2P26717 231 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
SNRPN-208ENST00000577565 AFF1P51825 1210 aaKnown RBP13.19□□□□□ -0.3
SNRPN-208ENST00000577565 NOMO2Q5JPE7 1267 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 PLA2G4DQ86XP0 818 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 ZNF707Q96C28 371 aaPredicted RBP13.19□□□□□ -0.3
SNRPN-208ENST00000577565 MAP7D2Q96T17 732 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 TRAIPQ9BWF2 469 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 GABBR1Q9UBS5 961 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 INPP5FQ9Y2H2 1132 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 WDR81Q562E7 1941 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 CHD6Q8TD26 2715 aa13.19□□□□□ -0.3
SNRPN-208ENST00000577565 CCDC195A0A1B0GUA6 201 aa13.18□□□□□ -0.3
SNRPN-208ENST00000577565 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
SNRPN-208ENST00000577565 ANHXE9PGG2 379 aa13.18□□□□□ -0.3
SNRPN-208ENST00000577565 MAGEB2O15479 319 aa13.18□□□□□ -0.3
SNRPN-208ENST00000577565 PRC1O43663 620 aa13.18□□□□□ -0.3
SNRPN-208ENST00000577565 OFD1O75665 1012 aa13.18□□□□□ -0.3
SNRPN-208ENST00000577565 DDHD2O94830 711 aa13.18□□□□□ -0.3
SNRPN-208ENST00000577565 RFX1P22670 979 aa13.18□□□□□ -0.3
SNRPN-208ENST00000577565 HTR4Q13639 388 aa13.18□□□□□ -0.3
SNRPN-208ENST00000577565 VARS2Q5ST30 1063 aaKnown RBP13.18□□□□□ -0.3
SNRPN-208ENST00000577565 RPP25Q9BUL9 199 aaKnown RBP13.18□□□□□ -0.3
SNRPN-208ENST00000577565 EMILIN2Q9BXX0 1053 aa13.18□□□□□ -0.3
SNRPN-208ENST00000577565 RHOBTB2Q9BYZ6 727 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms