RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 CARNS1A5YM72 827 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 CPLX1O14810 134 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 EDIL3O43854 480 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 DEXIO95424 95 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 TDP2O95551 362 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 FGFR4P22455 802 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 SFPQP23246 707 aaKnown RBP eCLIP11.75□□□□□ -0.53
TVP23B-208ENST00000575261 CYP3A7P24462 503 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 DNM2P50570 870 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 SSRP1Q08945 709 aaKnown RBP11.75□□□□□ -0.53
TVP23B-208ENST00000575261 SIGLEC14Q08ET2 396 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 DRP2Q13474 957 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 TARBP2Q15633 366 aaKnown RBP11.75□□□□□ -0.53
TVP23B-208ENST00000575261 MTERF2Q49AM1 385 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 XKR3Q5GH77 459 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 ZNF598Q86UK7 904 aaKnown RBP11.75□□□□□ -0.53
TVP23B-208ENST00000575261 SLC39A11Q8N1S5 342 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 HELQQ8TDG4 1101 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 CASP10Q92851 521 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 GJA10Q969M2 543 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 S1PR5Q9H228 398 aa11.75□□□□□ -0.53
TVP23B-208ENST00000575261 ALDH7A1P49419 539 aaKnown RBP11.74□□□□□ -0.53
TVP23B-208ENST00000575261 BMS1Q14692 1282 aaKnown RBP11.74□□□□□ -0.53
TVP23B-208ENST00000575261 PTPN21Q16825 1174 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 TWF2Q6IBS0 349 aaKnown RBP11.74□□□□□ -0.53
TVP23B-208ENST00000575261 GALNT17Q6IS24 598 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 CES5AQ6NT32 575 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 SYCE2Q6PIF2 218 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 CPLX2Q6PUV4 134 aaKnown RBP11.74□□□□□ -0.53
TVP23B-208ENST00000575261 MOXD1Q6UVY6 613 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 B3GNT9Q6UX72 402 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 RUFY3Q7L099 469 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 ZNF410Q86VK4 478 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 BLIDQ8IZY5 108 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 FAM177A1Q8N128 213 aaPredicted RBP11.74□□□□□ -0.53
TVP23B-208ENST00000575261 FBXL6Q8N531 539 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 DAGLBQ8NCG7 672 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 ETNPPLQ8TBG4 499 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 TMEM169Q96HH4 297 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 PRRX2Q99811 253 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 TRAIPQ9BWF2 469 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 APOL5Q9BWW9 433 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 NIFKQ9BYG3 293 aaKnown RBP11.74□□□□□ -0.53
TVP23B-208ENST00000575261 INO80BQ9C086 356 aaPredicted RBP11.74□□□□□ -0.53
TVP23B-208ENST00000575261 CHST12Q9NRB3 414 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 PIN4Q9Y237 131 aaKnown RBP11.74□□□□□ -0.53
TVP23B-208ENST00000575261 NR2E1Q9Y466 385 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 HCFC2Q9Y5Z7 792 aa11.74□□□□□ -0.53
TVP23B-208ENST00000575261 A0A087WZ62 844 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 IGKV6-21A0A0C4DH24 114 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 TMEM150BA6NC51 233 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 C2orf71A6NGG8 1288 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 M0R2N6 131 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 EPB41L2O43491 1005 aaKnown RBP11.73□□□□□ -0.53
TVP23B-208ENST00000575261 ZC3H11AO75152 810 aaKnown RBP eCLIP11.73□□□□□ -0.53
TVP23B-208ENST00000575261 CSDE1O75534 798 aaKnown RBP11.73□□□□□ -0.53
TVP23B-208ENST00000575261 SKIP12755 728 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 CA8P35219 290 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 PHKA2P46019 1235 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 PTPN5P54829 565 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 BCAR1P56945 870 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 TOB2Q14106 344 aaPredicted RBP11.73□□□□□ -0.53
TVP23B-208ENST00000575261 GLB1LQ6UWU2 654 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 ZBTB33Q86T24 672 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 RHPN2Q8IUC4 686 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 MRPL43Q8N983 215 aaKnown RBP11.73□□□□□ -0.53
TVP23B-208ENST00000575261 MBOAT7Q96N66 472 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 NECTIN4Q96NY8 510 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 CEP89Q96ST8 783 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 JPH2Q9BR39 696 aaPredicted RBP11.73□□□□□ -0.53
TVP23B-208ENST00000575261 FDXACB1Q9BRP7 624 aaPredicted RBP11.73□□□□□ -0.53
TVP23B-208ENST00000575261 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 TSHZ2Q9NRE2 1034 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 DDX25Q9UHL0 483 aaKnown RBP11.73□□□□□ -0.53
TVP23B-208ENST00000575261 CYP46A1Q9Y6A2 500 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 CFAP54Q96N23 3096 aa11.73□□□□□ -0.53
TVP23B-208ENST00000575261 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.72□□□□□ -0.53
TVP23B-208ENST00000575261 DKC1O60832 514 aaKnown RBP eCLIP11.72□□□□□ -0.53
TVP23B-208ENST00000575261 MAFO75444 373 aaPredicted RBP11.72□□□□□ -0.53
TVP23B-208ENST00000575261 SP100P23497 879 aaPredicted RBP11.72□□□□□ -0.53
TVP23B-208ENST00000575261 RAB27AP51159 221 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 PSMC5P62195 406 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 ITIH3Q06033 890 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 NONOQ15233 471 aaKnown RBP eCLIP11.72□□□□□ -0.53
TVP23B-208ENST00000575261 CATSPER4Q7RTX7 472 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 KRT25Q7Z3Z0 450 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 TMEM87AQ8NBN3 555 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 PRSS33Q8NF86 280 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 ASIC4Q96FT7 647 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 ZNF274Q96GC6 653 aaPredicted RBP11.72□□□□□ -0.53
TVP23B-208ENST00000575261 NLRP4Q96MN2 994 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 SH2D3AQ9BRG2 576 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 ZBP1Q9H171 429 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 ADAM7Q9H2U9 754 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 FAM105AQ9NUU6 356 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 SUCLA2Q9P2R7 463 aaPredicted RBP11.72□□□□□ -0.53
TVP23B-208ENST00000575261 VPS13AQ96RL7 3174 aa11.72□□□□□ -0.53
TVP23B-208ENST00000575261 DDX11L8A8MPP1 907 aa11.71□□□□□ -0.53
TVP23B-208ENST00000575261 NT5C1B-RDH14C9J2C7 533 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms