RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 SF3A1Q15459 793 aaKnown RBP22.98■■□□□ 1.27
CHMP6-204ENST00000572778 ZRSR1Q15695 479 aaKnown RBP22.98■■□□□ 1.27
CHMP6-204ENST00000572778 CRIPAKQ8N1N5 446 aa22.98■■□□□ 1.27
CHMP6-204ENST00000572778 SPRYD3Q8NCJ5 442 aa22.98■■□□□ 1.27
CHMP6-204ENST00000572778 ZNF689Q96CS4 500 aaPredicted RBP22.98■■□□□ 1.27
CHMP6-204ENST00000572778 C17orf80Q9BSJ5 609 aa22.98■■□□□ 1.27
CHMP6-204ENST00000572778 POLR3FQ9H1D9 316 aaPredicted RBP22.98■■□□□ 1.27
CHMP6-204ENST00000572778 ADGRA3Q8IWK6 1321 aa22.98■■□□□ 1.27
CHMP6-204ENST00000572778 CDH23Q9H251 3354 aa22.97■■□□□ 1.27
CHMP6-204ENST00000572778 ARL2P36404 184 aa22.97■■□□□ 1.27
CHMP6-204ENST00000572778 PHKA2P46019 1235 aa22.97■■□□□ 1.27
CHMP6-204ENST00000572778 TFDP1Q14186 410 aa22.97■■□□□ 1.27
CHMP6-204ENST00000572778 FAM102BQ5T8I3 360 aa22.97■■□□□ 1.27
CHMP6-204ENST00000572778 FAM173BQ6P4H8 233 aa22.97■■□□□ 1.27
CHMP6-204ENST00000572778 PADI6Q6TGC4 694 aa22.97■■□□□ 1.27
CHMP6-204ENST00000572778 SRGAP1Q7Z6B7 1085 aa22.97■■□□□ 1.27
CHMP6-204ENST00000572778 MCPH1Q8NEM0 835 aa22.97■■□□□ 1.27
CHMP6-204ENST00000572778 ASAP3Q8TDY4 903 aa22.97■■□□□ 1.27
CHMP6-204ENST00000572778 BHMT2Q9H2M3 363 aa22.97■■□□□ 1.27
CHMP6-204ENST00000572778 GPRC5CQ9NQ84 441 aa22.97■■□□□ 1.27
CHMP6-204ENST00000572778 PIN4Q9Y237 131 aaKnown RBP22.97■■□□□ 1.27
CHMP6-204ENST00000572778 GATMP50440 423 aa22.96■■□□□ 1.27
CHMP6-204ENST00000572778 FAM189BP81408 668 aa22.96■■□□□ 1.27
CHMP6-204ENST00000572778 PAN2Q504Q3 1202 aaKnown RBP22.96■■□□□ 1.27
CHMP6-204ENST00000572778 FBXO22Q8NEZ5 403 aa22.96■■□□□ 1.27
CHMP6-204ENST00000572778 SAMD11Q96NU1 681 aa22.96■■□□□ 1.27
CHMP6-204ENST00000572778 MMTAG2Q9BU76 263 aaKnown RBP22.96■■□□□ 1.27
CHMP6-204ENST00000572778 MINDY3Q9H8M7 445 aa22.96■■□□□ 1.27
CHMP6-204ENST00000572778 RC3H2Q9HBD1 1191 aaKnown RBP22.96■■□□□ 1.27
CHMP6-204ENST00000572778 CHST12Q9NRB3 414 aa22.96■■□□□ 1.27
CHMP6-204ENST00000572778 TMEM161AQ9NX61 479 aa22.96■■□□□ 1.27
CHMP6-204ENST00000572778 DACT1Q9NYF0 836 aa22.96■■□□□ 1.27
CHMP6-204ENST00000572778 DNM3Q9UQ16 869 aa22.96■■□□□ 1.27
CHMP6-204ENST00000572778 CLIC4Q9Y696 253 aa22.96■■□□□ 1.27
CHMP6-204ENST00000572778 E9PMD0 336 aa22.95■■□□□ 1.26
CHMP6-204ENST00000572778 GTPBP6O43824 516 aaPredicted RBP22.95■■□□□ 1.26
CHMP6-204ENST00000572778 GLRA2P23416 452 aa22.95■■□□□ 1.26
CHMP6-204ENST00000572778 GRB10Q13322 594 aa22.95■■□□□ 1.26
CHMP6-204ENST00000572778 CAPSQ13938 189 aa22.95■■□□□ 1.26
CHMP6-204ENST00000572778 TMEM192Q8IY95 271 aa22.95■■□□□ 1.26
CHMP6-204ENST00000572778 RNF169Q8NCN4 708 aa22.95■■□□□ 1.26
CHMP6-204ENST00000572778 GDPD5Q8WTR4 605 aa22.95■■□□□ 1.26
CHMP6-204ENST00000572778 PPM1EQ8WY54 764 aa22.95■■□□□ 1.26
CHMP6-204ENST00000572778 ZSCAN16Q9H4T2 348 aaPredicted RBP22.95■■□□□ 1.26
CHMP6-204ENST00000572778 LOXHD1Q8IVV2 1947 aa22.94■■□□□ 1.26
CHMP6-204ENST00000572778 CHD9Q3L8U1 2897 aa22.94■■□□□ 1.26
CHMP6-204ENST00000572778 CYP11B2P19099 503 aa22.94■■□□□ 1.26
CHMP6-204ENST00000572778 PTENP60484 403 aa22.94■■□□□ 1.26
CHMP6-204ENST00000572778 CEBPZQ03701 1054 aaKnown RBP22.94■■□□□ 1.26
CHMP6-204ENST00000572778 EPC2Q52LR7 807 aa22.94■■□□□ 1.26
CHMP6-204ENST00000572778 TWF2Q6IBS0 349 aaKnown RBP22.94■■□□□ 1.26
CHMP6-204ENST00000572778 ECHDC2Q86YB7 292 aa22.94■■□□□ 1.26
CHMP6-204ENST00000572778 CMTR2Q8IYT2 770 aaKnown RBP22.94■■□□□ 1.26
CHMP6-204ENST00000572778 MICALL1Q8N3F8 863 aa22.94■■□□□ 1.26
CHMP6-204ENST00000572778 CDK5RAP3Q96JB5 506 aa22.94■■□□□ 1.26
CHMP6-204ENST00000572778 PLIN2Q99541 437 aa22.94■■□□□ 1.26
CHMP6-204ENST00000572778 ELAC1Q9H777 363 aaKnown RBP22.94■■□□□ 1.26
CHMP6-204ENST00000572778 A0A0U1RQF3 1178 aa22.93■■□□□ 1.26
CHMP6-204ENST00000572778 TBKBP1A7MCY6 615 aa22.93■■□□□ 1.26
CHMP6-204ENST00000572778 INO80B-WBP1J3KQ70 363 aa22.93■■□□□ 1.26
CHMP6-204ENST00000572778 EYA4O95677 639 aa22.93■■□□□ 1.26
CHMP6-204ENST00000572778 FGFR1P11362 822 aa22.93■■□□□ 1.26
CHMP6-204ENST00000572778 POU5F1BQ06416 359 aa22.93■■□□□ 1.26
CHMP6-204ENST00000572778 CCDC85BQ15834 202 aaPredicted RBP22.93■■□□□ 1.26
CHMP6-204ENST00000572778 CABP7Q86V35 215 aa22.93■■□□□ 1.26
CHMP6-204ENST00000572778 AK8Q96MA6 479 aa22.93■■□□□ 1.26
CHMP6-204ENST00000572778 LRRIQ4A6NIV6 560 aa22.92■■□□□ 1.26
CHMP6-204ENST00000572778 ERLIN2O94905 339 aa22.92■■□□□ 1.26
CHMP6-204ENST00000572778 CTNNB1P35222 781 aa22.92■■□□□ 1.26
CHMP6-204ENST00000572778 UBA7P41226 1012 aa22.92■■□□□ 1.26
CHMP6-204ENST00000572778 FOXD4L5Q5VV16 416 aaPredicted RBP22.92■■□□□ 1.26
CHMP6-204ENST00000572778 KCNK18Q7Z418 384 aa22.92■■□□□ 1.26
CHMP6-204ENST00000572778 FOXD4L4Q8WXT5 416 aaPredicted RBP22.92■■□□□ 1.26
CHMP6-204ENST00000572778 PNMA5Q96PV4 448 aa22.92■■□□□ 1.26
CHMP6-204ENST00000572778 NT5C3AQ9H0P0 336 aa22.92■■□□□ 1.26
CHMP6-204ENST00000572778 POLD4Q9HCU8 107 aa22.92■■□□□ 1.26
CHMP6-204ENST00000572778 AGPAT5Q9NUQ2 364 aa22.92■■□□□ 1.26
CHMP6-204ENST00000572778 MTCH2Q9Y6C9 303 aa22.92■■□□□ 1.26
CHMP6-204ENST00000572778 MRPL42Q9Y6G3 142 aaKnown RBP22.92■■□□□ 1.26
CHMP6-204ENST00000572778 TTC3P53804 2025 aa22.92■■□□□ 1.26
CHMP6-204ENST00000572778 LPXNO60711 386 aa22.91■■□□□ 1.26
CHMP6-204ENST00000572778 MARCKSP29966 332 aaPredicted RBP22.91■■□□□ 1.26
CHMP6-204ENST00000572778 LONP1P36776 959 aaKnown RBP22.91■■□□□ 1.26
CHMP6-204ENST00000572778 BMPR1AP36894 532 aa22.91■■□□□ 1.26
CHMP6-204ENST00000572778 GRIN1Q05586 938 aa22.91■■□□□ 1.26
CHMP6-204ENST00000572778 PTPAQ15257 358 aa22.91■■□□□ 1.26
CHMP6-204ENST00000572778 HYIQ5T013 277 aa22.91■■□□□ 1.26
CHMP6-204ENST00000572778 RWDD3Q9Y3V2 267 aa22.91■■□□□ 1.26
CHMP6-204ENST00000572778 ARID2Q68CP9 1835 aa22.91■■□□□ 1.26
CHMP6-204ENST00000572778 HOXA2O43364 376 aa22.9■■□□□ 1.26
CHMP6-204ENST00000572778 EOMESO95936 686 aa22.9■■□□□ 1.26
CHMP6-204ENST00000572778 SSBP05455 408 aaKnown RBP eCLIP22.9■■□□□ 1.26
CHMP6-204ENST00000572778 NCBP1Q09161 790 aaKnown RBP22.9■■□□□ 1.26
CHMP6-204ENST00000572778 GPM6BQ13491 265 aa22.9■■□□□ 1.26
CHMP6-204ENST00000572778 IFNLR1Q8IU57 520 aaPredicted RBP22.9■■□□□ 1.26
CHMP6-204ENST00000572778 ABI1Q8IZP0 508 aa22.9■■□□□ 1.26
CHMP6-204ENST00000572778 CLP1Q92989 425 aaKnown RBP22.9■■□□□ 1.26
CHMP6-204ENST00000572778 CALML4Q96GE6 196 aa22.9■■□□□ 1.26
CHMP6-204ENST00000572778 FAM105AQ9NUU6 356 aa22.9■■□□□ 1.26
CHMP6-204ENST00000572778 COL4A6Q14031 1691 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms