RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 U2AF2P26368 475 aaKnown RBP eCLIP19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 MCM2P49736 904 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 RARRES1P49788 294 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 TOB1P50616 345 aaPredicted RBP19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 TWF2Q6IBS0 349 aaKnown RBP19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 FAM43BQ6ZT52 329 aaPredicted RBP19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 MAEAQ7L5Y9 396 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 FERMT3Q86UX7 667 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 CATSPER3Q86XQ3 398 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 ABI1Q8IZP0 508 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 RNF149Q8NC42 400 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 TCP11Q8WWU5 503 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 PLVAPQ9BX97 442 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 ANKEF1Q9NU02 776 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 RNF19AQ9NV58 838 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 TYW1Q9NV66 732 aaKnown RBP19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 DACT1Q9NYF0 836 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 PCDHB6Q9Y5E3 794 aa19.82■□□□□ 0.76
CTDNEP1-207ENST00000572043 H3BQV1 296 aa19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 USO1O60763 962 aaKnown RBP19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 ITGB1P05556 798 aa19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 TRAPPC10P48553 1259 aa19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 ORC2Q13416 577 aaPredicted RBP19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 POTEGQ6S5H5 508 aa19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 ERMNQ8TAM6 284 aa19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 ADAMTS19Q8TE59 1207 aa19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 CASD1Q96PB1 797 aa19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 TMEM117Q9H0C3 514 aa19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 NSUN3Q9H649 340 aaKnown RBP19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 MINDY3Q9H8M7 445 aa19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 SMC3Q9UQE7 1217 aa19.81■□□□□ 0.76
CTDNEP1-207ENST00000572043 EVPLQ92817 2033 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 A0A0U1RQF3 1178 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 GAS2O43903 313 aaKnown RBP19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 DGAT1O75907 488 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 DNAJB1P25685 340 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 AAK1Q2M2I8 961 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 C4orf32Q8N8J7 132 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 HELQQ8TDG4 1101 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 ASAP3Q8TDY4 903 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 POF1BQ8WVV4 589 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 LPPQ93052 612 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 NECAB3Q96P71 396 aaPredicted RBP19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 UBE2ZQ9H832 354 aaPredicted RBP19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 TUFT1Q9NNX1 390 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 CHST12Q9NRB3 414 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 TTC3P53804 2025 aa19.8■□□□□ 0.76
CTDNEP1-207ENST00000572043 HOXA2O43364 376 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 ATF7P17544 494 aaPredicted RBP19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 KCNA5P22460 613 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 PBX3P40426 434 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 PTGDRQ13258 359 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 CLLU1OSQ5K130 101 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 LRRC55Q6ZSA7 311 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 THNSL1Q8IYQ7 743 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 SPPL3Q8TCT6 385 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 P2RX5Q93086 422 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 LMAN2LQ9H0V9 348 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 POLR3FQ9H1D9 316 aaPredicted RBP19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 CWH43Q9H720 699 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 GPRC5CQ9NQ84 441 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 AAASQ9NRG9 546 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 PCDHB12Q9Y5F1 795 aa19.79■□□□□ 0.76
CTDNEP1-207ENST00000572043 ASAP2O43150 1006 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 BMP1P13497 986 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 IRS1P35568 1242 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 CCT6AP40227 531 aaKnown RBP19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 PHKA2P46019 1235 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 CAMK1Q14012 370 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 SRGAP1Q7Z6B7 1085 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 ZNF598Q86UK7 904 aaKnown RBP19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 LRRC43Q8N309 656 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 COLGALT1Q8NBJ5 622 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 POLR3CQ9BUI4 534 aaPredicted RBP19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 BACH2Q9BYV9 841 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 IGFLR1Q9H665 355 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 AGPAT5Q9NUQ2 364 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 FAM105AQ9NUU6 356 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 PCDHGC5Q9Y5F6 944 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 LOXHD1Q8IVV2 1947 aa19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 PRRC2BQ5JSZ5 2229 aaKnown RBP19.78■□□□□ 0.76
CTDNEP1-207ENST00000572043 MEIS3P2A8K0S8 358 aa19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 INO80B-WBP1J3KQ70 363 aa19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 EOMESO95936 686 aa19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 FXR2P51116 673 aaKnown RBP eCLIP19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 CAPSQ13938 189 aa19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 TFDP1Q14186 410 aa19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 MXD4Q14582 209 aaPredicted RBP19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 ECM1Q16610 540 aa19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 NAALADL2Q58DX5 795 aa19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 NACC1Q96RE7 527 aa19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 UHRF1Q96T88 793 aaPredicted RBP19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 CLDND1Q9NY35 253 aa19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 LRWD1Q9UFC0 647 aa19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 INPP5FQ9Y2H2 1132 aa19.77■□□□□ 0.76
CTDNEP1-207ENST00000572043 WDR81Q562E7 1941 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 MYO9BQ13459 2157 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 ARHGEF35A5YM69 484 aa19.76■□□□□ 0.75
CTDNEP1-207ENST00000572043 PP2D1A8MPX8 630 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms