RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 FGF18O76093 207 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 FGFR1P11362 822 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 IL9P15248 144 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 NEK4P51957 841 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 PLCB3Q01970 1234 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 EPHA7Q15375 998 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 TMEM31Q5JXX7 168 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 FAM102BQ5T8I3 360 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 TWF2Q6IBS0 349 aaKnown RBP10.9□□□□□ -0.66
CIITA-207ENST00000571545 ANO5Q75V66 913 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 RHPN2Q8IUC4 686 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 MICAL1Q8TDZ2 1067 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 GJA10Q969M2 543 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 CEP170P1Q96L14 293 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 CCDC43Q96MW1 224 aaKnown RBP10.9□□□□□ -0.66
CIITA-207ENST00000571545 ZNF558Q96NG5 402 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 LXNQ9BS40 222 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 ZSWIM4Q9H7M6 989 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 NGRNQ9NPE2 291 aaKnown RBP10.9□□□□□ -0.66
CIITA-207ENST00000571545 TYW1Q9NV66 732 aaKnown RBP10.9□□□□□ -0.66
CIITA-207ENST00000571545 SUCLA2Q9P2R7 463 aaPredicted RBP10.9□□□□□ -0.66
CIITA-207ENST00000571545 HCN4Q9Y3Q4 1203 aa10.9□□□□□ -0.66
CIITA-207ENST00000571545 A0A087WZ62 844 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 PI4K2BG5E9Z4 385 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 NEMFO60524 1076 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 COL9A1P20849 921 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 YWHABP31946 246 aaKnown RBP10.89□□□□□ -0.67
CIITA-207ENST00000571545 ALDH7A1P49419 539 aaKnown RBP10.89□□□□□ -0.67
CIITA-207ENST00000571545 NCBP1Q09161 790 aaKnown RBP10.89□□□□□ -0.67
CIITA-207ENST00000571545 ORC2Q13416 577 aaPredicted RBP10.89□□□□□ -0.67
CIITA-207ENST00000571545 ADAM15Q13444 863 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 MXD4Q14582 209 aaPredicted RBP10.89□□□□□ -0.67
CIITA-207ENST00000571545 SMAD2Q15796 467 aaKnown RBP10.89□□□□□ -0.67
CIITA-207ENST00000571545 CALCRLQ16602 461 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 ME3Q16798 604 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 NCAPH2Q6IBW4 605 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 CATSPER4Q7RTX7 472 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 SRGAP1Q7Z6B7 1085 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 NSUN7Q8NE18 718 aaKnown RBP10.89□□□□□ -0.67
CIITA-207ENST00000571545 MRPS27Q92552 414 aaKnown RBP10.89□□□□□ -0.67
CIITA-207ENST00000571545 PGBD4Q96DM1 585 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 NLRP4Q96MN2 994 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 CASD1Q96PB1 797 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 CEP89Q96ST8 783 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 FDXACB1Q9BRP7 624 aaPredicted RBP10.89□□□□□ -0.67
CIITA-207ENST00000571545 IGFLR1Q9H665 355 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 TLE6Q9H808 572 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 ENTPD7Q9NQZ7 604 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 DAXXQ9UER7 740 aaPredicted RBP10.89□□□□□ -0.67
CIITA-207ENST00000571545 PIN4Q9Y237 131 aaKnown RBP10.89□□□□□ -0.67
CIITA-207ENST00000571545 ARIH1Q9Y4X5 557 aaPredicted RBP10.89□□□□□ -0.67
CIITA-207ENST00000571545 COL4A3BPQ9Y5P4 624 aa10.89□□□□□ -0.67
CIITA-207ENST00000571545 XIRP2A4UGR9 3374 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 EML1O00423 815 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 MBTPS2O43462 519 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 GPR37L1O60883 481 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 TBX10O75333 385 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 CSPG5O95196 566 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 STBD1O95210 358 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 CTDNEP1O95476 244 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 EYA4O95677 639 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 CD44P16070 742 aaKnown RBP10.88□□□□□ -0.67
CIITA-207ENST00000571545 AXLP30530 894 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 LTBRP36941 435 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 PHKA2P46019 1235 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 NRIP1P48552 1158 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 GATMP50440 423 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 HMGN5P82970 282 aaKnown RBP10.88□□□□□ -0.67
CIITA-207ENST00000571545 ZP2Q05996 745 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 COASYQ13057 564 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 CAMK1Q14012 370 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 GIT2Q14161 759 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 TFDP1Q14186 410 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 PLA2G4FQ68DD2 849 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 KCNT2Q6UVM3 1135 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 GLB1LQ6UWU2 654 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 DIS3L2Q8IYB7 885 aaKnown RBP10.88□□□□□ -0.67
CIITA-207ENST00000571545 RNF169Q8NCN4 708 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 SMRP1Q8NCR6 262 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 CNNM3Q8NE01 707 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 URGCPQ8TCY9 931 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 OXER1Q8TDS5 423 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 HAS1Q92839 578 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 ZSCAN31Q96LW9 406 aaPredicted RBP10.88□□□□□ -0.67
CIITA-207ENST00000571545 MTRQ99707 1265 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 LLPHQ9BRT6 129 aaKnown RBP10.88□□□□□ -0.67
CIITA-207ENST00000571545 DHX33Q9H6R0 707 aaKnown RBP10.88□□□□□ -0.67
CIITA-207ENST00000571545 CWH43Q9H720 699 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 AGPAT5Q9NUQ2 364 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 SPG21Q9NZD8 308 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 PCDHA12Q9UN75 941 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 LIMCH1Q9UPQ0 1083 aa10.88□□□□□ -0.67
CIITA-207ENST00000571545 CNTNAP2Q9UHC6 1331 aa10.87□□□□□ -0.67
CIITA-207ENST00000571545 MUC3AQ02505 3323 aa10.87□□□□□ -0.67
CIITA-207ENST00000571545 FSCN2O14926 492 aa10.87□□□□□ -0.67
CIITA-207ENST00000571545 DCXO43602 365 aa10.87□□□□□ -0.67
CIITA-207ENST00000571545 DGAT1O75907 488 aa10.87□□□□□ -0.67
CIITA-207ENST00000571545 ERLIN2O94905 339 aa10.87□□□□□ -0.67
CIITA-207ENST00000571545 LYPLA2O95372 231 aa10.87□□□□□ -0.67
CIITA-207ENST00000571545 DNAJB1P25685 340 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms