RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MYH11P35749 1972 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 PHIPQ8WWQ0 1821 aa3.91□□□□□ -1.78
SMG6-208ENST00000570874 PTPRFP10586 1907 aa3.9□□□□□ -1.78
SMG6-208ENST00000570874 DNAJC25-GNG10A0A024R161 153 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 B4DLN1 442 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 B4E1Z4 1266 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 CFAP99D6REC4 459 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 F8VZ95 297 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 GIPC1O14908 333 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 POLR3GO15318 223 aaPredicted RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 GPR39O43194 453 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 HOXC11O43248 304 aaPredicted RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 FRS3O43559 492 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 EVI5O60447 810 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 USO1O60763 962 aaKnown RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 FBXO21O94952 628 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 BAG4O95429 457 aaKnown RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 CTDNEP1O95476 244 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 STAMBPO95630 424 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 GUCA1CO95843 209 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 MT-ND3P03897 115 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 DNTTP04053 509 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 ZFYP08048 801 aaPredicted RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 CYP2D6P10635 497 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 ZKSCAN1P17029 563 aaPredicted RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 TMOD1P28289 359 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 GJB2P29033 226 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 HIBADHP31937 336 aaKnown RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 INPP5BP32019 993 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 KRT9P35527 623 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 GNL1P36915 607 aaPredicted RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 ADH7P40394 386 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 KCNJ6P48051 423 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 ALDH5A1P51649 535 aaPredicted RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 AP2B1P63010 937 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 GTF2IP78347 998 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 UBXN1Q04323 297 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 PPP2R3AQ06190 1150 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 SSRP1Q08945 709 aaKnown RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 MAP3K12Q12852 859 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 AP3B2Q13367 1082 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 CNGA3Q16281 694 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 SLC15A2Q16348 729 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 TUBB8Q3ZCM7 444 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 PREPLQ4J6C6 727 aaPredicted RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 SLC45A4Q5BKX6 768 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 GPATCH4Q5T3I0 446 aaKnown RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 LLGL2Q6P1M3 1020 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 TLDC1Q6P9B6 456 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 BRICD5Q6PL45 260 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 ENOSF1Q7L5Y1 443 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 KDELC2Q7Z4H8 507 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 VSIG1Q86XK7 387 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 SPATS2Q86XZ4 545 aaKnown RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 MB21D2Q8IYB1 491 aaPredicted RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 COLGALT2Q8IYK4 626 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 TBC1D21Q8IYX1 336 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 NRSN1Q8IZ57 195 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 PHTF2Q8N3S3 785 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMG6-208ENST00000570874 GOLGA6L1Q8N7Z2 621 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 ZNF280CQ8ND82 737 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 PPP1R14CQ8TAE6 165 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 NSUN6Q8TEA1 469 aaKnown RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMG6-208ENST00000570874 BRF1Q92994 677 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 AIDAQ96BJ3 306 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 RBM17Q96I25 401 aaKnown RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 C1orf74Q96LT6 269 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 CCDC114Q96M63 670 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 CSRNP1Q96S65 589 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 C7orf25Q9BPX7 421 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 ALG1Q9BT22 464 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 MXD3Q9BW11 206 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 NIFKQ9BYG3 293 aaKnown RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 SLC7A5P2Q9GIP4 190 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 KCTD10Q9H3F6 313 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMG6-208ENST00000570874 BRMS1Q9HCU9 246 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 PRDM5Q9NQX1 630 aaPredicted RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 TCP11L1Q9NUJ3 509 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 AATFQ9NY61 560 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMG6-208ENST00000570874 PSD3Q9NYI0 1048 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 ANKIB1Q9P2G1 1089 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 LRP2BPQ9P2M1 347 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 LAMP5Q9UJQ1 280 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 NSFL1CQ9UNZ2 370 aaKnown RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 LIMCH1Q9UPQ0 1083 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 CRYL1Q9Y2S2 319 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 PCDHB3Q9Y5E6 796 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMG6-208ENST00000570874 SLC4A4Q9Y6R1 1079 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 MYH9P35579 1960 aaKnown RBP3.9□□□□□ -1.79
SMG6-208ENST00000570874 XDHP47989 1333 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 WDR90Q96KV7 1748 aa3.9□□□□□ -1.79
SMG6-208ENST00000570874 RBBP6Q7Z6E9 1792 aaKnown RBP3.89□□□□□ -1.79
SMG6-208ENST00000570874 OTOFQ9HC10 1997 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 SNED1Q8TER0 1413 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 MAGEB6P1A0A0J9YX57 407 aa3.89□□□□□ -1.79
SMG6-208ENST00000570874 CCDC69A6NI79 296 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms