RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 RNF19AQ9NV58 838 aa28.22■■■□□ 2.11
CCNF-205ENST00000569093 COG5Q9UP83 839 aa28.22■■■□□ 2.11
CCNF-205ENST00000569093 TCF20Q9UGU0 1960 aaKnown RBP28.21■■■□□ 2.11
CCNF-205ENST00000569093 CSPG5O95196 566 aa28.21■■■□□ 2.11
CCNF-205ENST00000569093 KCNQ1P51787 676 aa28.21■■■□□ 2.11
CCNF-205ENST00000569093 LAMTOR4Q0VGL1 99 aa28.21■■■□□ 2.11
CCNF-205ENST00000569093 ORC2Q13416 577 aaPredicted RBP28.21■■■□□ 2.11
CCNF-205ENST00000569093 C4orf32Q8N8J7 132 aa28.21■■■□□ 2.11
CCNF-205ENST00000569093 RNF169Q8NCN4 708 aa28.21■■■□□ 2.11
CCNF-205ENST00000569093 IL27Q8NEV9 243 aa28.21■■■□□ 2.11
CCNF-205ENST00000569093 PSPC1Q8WXF1 523 aaKnown RBP28.21■■■□□ 2.11
CCNF-205ENST00000569093 SYMPKQ92797 1274 aaKnown RBP28.21■■■□□ 2.11
CCNF-205ENST00000569093 PLVAPQ9BX97 442 aa28.21■■■□□ 2.11
CCNF-205ENST00000569093 INO80BQ9C086 356 aaPredicted RBP28.21■■■□□ 2.11
CCNF-205ENST00000569093 ANKEF1Q9NU02 776 aa28.21■■■□□ 2.11
CCNF-205ENST00000569093 NOL7Q9UMY1 257 aaKnown RBP28.21■■■□□ 2.11
CCNF-205ENST00000569093 PLAGL2Q9UPG8 496 aa28.21■■■□□ 2.11
CCNF-205ENST00000569093 ATG2AQ2TAZ0 1938 aa28.21■■■□□ 2.11
CCNF-205ENST00000569093 MED24O75448 989 aa28.2■■■□□ 2.1
CCNF-205ENST00000569093 SFPQP23246 707 aaKnown RBP eCLIP28.2■■■□□ 2.1
CCNF-205ENST00000569093 GJB2P29033 226 aa28.2■■■□□ 2.1
CCNF-205ENST00000569093 TRAPPC10P48553 1259 aa28.2■■■□□ 2.1
CCNF-205ENST00000569093 SPOUT1Q5T280 376 aaKnown RBP28.2■■■□□ 2.1
CCNF-205ENST00000569093 CATSPER3Q86XQ3 398 aa28.2■■■□□ 2.1
CCNF-205ENST00000569093 KLHL23Q8NBE8 558 aa28.2■■■□□ 2.1
CCNF-205ENST00000569093 MTRQ99707 1265 aa28.2■■■□□ 2.1
CCNF-205ENST00000569093 TYW1Q9NV66 732 aaKnown RBP28.2■■■□□ 2.1
CCNF-205ENST00000569093 A0A0U1RQF3 1178 aa28.19■■■□□ 2.1
CCNF-205ENST00000569093 ITGB1P05556 798 aa28.19■■■□□ 2.1
CCNF-205ENST00000569093 MCM2P49736 904 aa28.19■■■□□ 2.1
CCNF-205ENST00000569093 TCEAL5Q5H9L2 206 aa28.19■■■□□ 2.1
CCNF-205ENST00000569093 CATSPER4Q7RTX7 472 aa28.19■■■□□ 2.1
CCNF-205ENST00000569093 FERMT3Q86UX7 667 aa28.19■■■□□ 2.1
CCNF-205ENST00000569093 TCP11Q8WWU5 503 aa28.19■■■□□ 2.1
CCNF-205ENST00000569093 P2RX5Q93086 422 aa28.19■■■□□ 2.1
CCNF-205ENST00000569093 CASD1Q96PB1 797 aa28.19■■■□□ 2.1
CCNF-205ENST00000569093 MINDY3Q9H8M7 445 aa28.19■■■□□ 2.1
CCNF-205ENST00000569093 CHST12Q9NRB3 414 aa28.19■■■□□ 2.1
CCNF-205ENST00000569093 KIF3AQ9Y496 699 aa28.19■■■□□ 2.1
CCNF-205ENST00000569093 BMP1P13497 986 aa28.18■■■□□ 2.1
CCNF-205ENST00000569093 DNAJB1P25685 340 aa28.18■■■□□ 2.1
CCNF-205ENST00000569093 RARRES1P49788 294 aa28.18■■■□□ 2.1
CCNF-205ENST00000569093 CAMK1Q14012 370 aa28.18■■■□□ 2.1
CCNF-205ENST00000569093 TIGD5Q53EQ6 642 aa28.18■■■□□ 2.1
CCNF-205ENST00000569093 SPPL3Q8TCT6 385 aa28.18■■■□□ 2.1
CCNF-205ENST00000569093 TMEM117Q9H0C3 514 aa28.18■■■□□ 2.1
CCNF-205ENST00000569093 LMAN2LQ9H0V9 348 aa28.18■■■□□ 2.1
CCNF-205ENST00000569093 DACT1Q9NYF0 836 aa28.18■■■□□ 2.1
CCNF-205ENST00000569093 PIN4Q9Y237 131 aaKnown RBP28.18■■■□□ 2.1
CCNF-205ENST00000569093 PCDHB6Q9Y5E3 794 aa28.18■■■□□ 2.1
CCNF-205ENST00000569093 GAS2O43903 313 aaKnown RBP28.17■■■□□ 2.1
CCNF-205ENST00000569093 ATF7P17544 494 aaPredicted RBP28.17■■■□□ 2.1
CCNF-205ENST00000569093 AAK1Q2M2I8 961 aa28.17■■■□□ 2.1
CCNF-205ENST00000569093 MCTP1Q6DN14 999 aa28.17■■■□□ 2.1
CCNF-205ENST00000569093 LRRC55Q6ZSA7 311 aa28.17■■■□□ 2.1
CCNF-205ENST00000569093 ZNF598Q86UK7 904 aaKnown RBP28.17■■■□□ 2.1
CCNF-205ENST00000569093 RNF149Q8NC42 400 aa28.17■■■□□ 2.1
CCNF-205ENST00000569093 NSUN3Q9H649 340 aaKnown RBP28.17■■■□□ 2.1
CCNF-205ENST00000569093 CWH43Q9H720 699 aa28.17■■■□□ 2.1
CCNF-205ENST00000569093 TUFT1Q9NNX1 390 aa28.17■■■□□ 2.1
CCNF-205ENST00000569093 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.16■■■□□ 2.1
CCNF-205ENST00000569093 ASAP2O43150 1006 aa28.16■■■□□ 2.1
CCNF-205ENST00000569093 LONRF3Q496Y0 759 aa28.16■■■□□ 2.1
CCNF-205ENST00000569093 NAALADL2Q58DX5 795 aa28.16■■■□□ 2.1
CCNF-205ENST00000569093 CLLU1OSQ5K130 101 aa28.16■■■□□ 2.1
CCNF-205ENST00000569093 TWF2Q6IBS0 349 aaKnown RBP28.16■■■□□ 2.1
CCNF-205ENST00000569093 SRGAP1Q7Z6B7 1085 aa28.16■■■□□ 2.1
CCNF-205ENST00000569093 CCDC43Q96MW1 224 aaKnown RBP28.16■■■□□ 2.1
CCNF-205ENST00000569093 POLR3CQ9BUI4 534 aaPredicted RBP28.16■■■□□ 2.1
CCNF-205ENST00000569093 BACH2Q9BYV9 841 aa28.16■■■□□ 2.1
CCNF-205ENST00000569093 UBE2ZQ9H832 354 aaPredicted RBP28.16■■■□□ 2.1
CCNF-205ENST00000569093 PLXNA4Q9HCM2 1894 aa28.16■■■□□ 2.1
CCNF-205ENST00000569093 HOXA2O43364 376 aa28.15■■■□□ 2.1
CCNF-205ENST00000569093 DGAT1O75907 488 aa28.15■■■□□ 2.1
CCNF-205ENST00000569093 EOMESO95936 686 aa28.15■■■□□ 2.1
CCNF-205ENST00000569093 XRCC6P12956 609 aaKnown RBP eCLIP28.15■■■□□ 2.1
CCNF-205ENST00000569093 PHKA2P46019 1235 aa28.15■■■□□ 2.1
CCNF-205ENST00000569093 PTGDRQ13258 359 aa28.15■■■□□ 2.1
CCNF-205ENST00000569093 POTEGQ6S5H5 508 aa28.15■■■□□ 2.1
CCNF-205ENST00000569093 HELQQ8TDG4 1101 aa28.15■■■□□ 2.1
CCNF-205ENST00000569093 ASAP3Q8TDY4 903 aa28.15■■■□□ 2.1
CCNF-205ENST00000569093 ADAMTS19Q8TE59 1207 aa28.15■■■□□ 2.1
CCNF-205ENST00000569093 SMC3Q9UQE7 1217 aa28.15■■■□□ 2.1
CCNF-205ENST00000569093 USO1O60763 962 aaKnown RBP28.14■■■□□ 2.1
CCNF-205ENST00000569093 ARL2P36404 184 aa28.14■■■□□ 2.1
CCNF-205ENST00000569093 ABI1Q8IZP0 508 aa28.14■■■□□ 2.1
CCNF-205ENST00000569093 COLGALT1Q8NBJ5 622 aa28.14■■■□□ 2.1
CCNF-205ENST00000569093 POF1BQ8WVV4 589 aa28.14■■■□□ 2.1
CCNF-205ENST00000569093 LPPQ93052 612 aa28.14■■■□□ 2.1
CCNF-205ENST00000569093 NACC1Q96RE7 527 aa28.14■■■□□ 2.1
CCNF-205ENST00000569093 AGPAT5Q9NUQ2 364 aa28.14■■■□□ 2.1
CCNF-205ENST00000569093 PCDHB12Q9Y5F1 795 aa28.14■■■□□ 2.1
CCNF-205ENST00000569093 RPA1P27694 616 aa28.13■■■□□ 2.09
CCNF-205ENST00000569093 IRS1P35568 1242 aa28.13■■■□□ 2.09
CCNF-205ENST00000569093 FXR2P51116 673 aaKnown RBP eCLIP28.13■■■□□ 2.09
CCNF-205ENST00000569093 MXD4Q14582 209 aaPredicted RBP28.13■■■□□ 2.09
CCNF-205ENST00000569093 MAEAQ7L5Y9 396 aa28.13■■■□□ 2.09
CCNF-205ENST00000569093 ERMNQ8TAM6 284 aa28.13■■■□□ 2.09
CCNF-205ENST00000569093 NECAB3Q96P71 396 aaPredicted RBP28.13■■■□□ 2.09
CCNF-205ENST00000569093 TRAIPQ9BWF2 469 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms