RNA–Protein interactions for RNA: ENST00000567705.5

INO80E-210, Transcript of INO80 complex subunit E, human

TSL 3 BASIC

Gene INO80E, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80E-210	ENST00000567705	TRAIP	Q9BWF2	469 aa		18.43	■□□□□ 0.54
INO80E-210	ENST00000567705	NKX2-4	Q9H2Z4	354 aa		18.43	■□□□□ 0.54
INO80E-210	ENST00000567705		E9PMD0	336 aa		18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	BRD1	O95696	1058 aa		18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	DDIT3	P35638	169 aa		18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	PTEN	P60484	403 aa		18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	CAPS	Q13938	189 aa		18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	MXD4	Q14582	209 aa	Predicted RBP	18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	PADI6	Q6TGC4	694 aa		18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	MYOCD	Q8IZQ8	938 aa		18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	LINC00301	Q8NCQ3	95 aa		18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	MCPH1	Q8NEM0	835 aa		18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	GCOM2	Q9BZD3	368 aa	Predicted RBP	18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	BHMT2	Q9H2M3	363 aa		18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	INSL6	Q9Y581	213 aa		18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	MYH15	Q9Y2K3	1946 aa		18.42	■□□□□ 0.54
INO80E-210	ENST00000567705	XIRP2	A4UGR9	3374 aa		18.41	■□□□□ 0.54
INO80E-210	ENST00000567705	TLL1	O43897	1013 aa		18.41	■□□□□ 0.54
INO80E-210	ENST00000567705	USO1	O60763	962 aa	Known RBP	18.41	■□□□□ 0.54
INO80E-210	ENST00000567705	CSDE1	O75534	798 aa	Known RBP	18.41	■□□□□ 0.54
INO80E-210	ENST00000567705	NFX1	Q12986	1120 aa	Known RBP	18.41	■□□□□ 0.54
INO80E-210	ENST00000567705	AMHR2	Q16671	573 aa		18.41	■□□□□ 0.54
INO80E-210	ENST00000567705	C1orf186	Q6ZWK4	172 aa		18.41	■□□□□ 0.54
INO80E-210	ENST00000567705	SRGAP1	Q7Z6B7	1085 aa		18.41	■□□□□ 0.54
INO80E-210	ENST00000567705	ADAM2	Q99965	735 aa		18.41	■□□□□ 0.54
INO80E-210	ENST00000567705	CCSER1	Q9C0I3	900 aa		18.41	■□□□□ 0.54
INO80E-210	ENST00000567705	SLC28A3	Q9HAS3	691 aa		18.41	■□□□□ 0.54
INO80E-210	ENST00000567705	GPRC5C	Q9NQ84	441 aa		18.41	■□□□□ 0.54
INO80E-210	ENST00000567705	DGKI	O75912	1065 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	HSP90AA1	P07900	732 aa	Known RBP	18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	FGFR4	P22455	802 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	HOXA11	P31270	313 aa	Predicted RBP	18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	SARS	P49591	514 aa	Known RBP	18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	CDCA2	Q69YH5	1023 aa	Predicted RBP	18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	USP49	Q70CQ1	688 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	SLC24A5	Q71RS6	500 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	SPRED2	Q7Z698	418 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	NPAS4	Q8IUM7	802 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	DAW1	Q8N136	415 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	RNF149	Q8NC42	400 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	SPRYD3	Q8NCJ5	442 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	NLRP4	Q96MN2	994 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	INO80B	Q9C086	356 aa	Predicted RBP	18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	NT5C3A	Q9H0P0	336 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	CSRNP2	Q9H175	543 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	CHST12	Q9NRB3	414 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	C1orf112	Q9NSG2	853 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	BLOC1S4	Q9NUP1	217 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	DNM3	Q9UQ16	869 aa		18.4	■□□□□ 0.54
INO80E-210	ENST00000567705	LINC01553	A4QN01	128 aa		18.39	■□□□□ 0.53
INO80E-210	ENST00000567705	MARCKS	P29966	332 aa	Predicted RBP	18.39	■□□□□ 0.53
INO80E-210	ENST00000567705	SLC12A3	P55017	1021 aa		18.39	■□□□□ 0.53
INO80E-210	ENST00000567705	MAPK7	Q13164	816 aa		18.39	■□□□□ 0.53
INO80E-210	ENST00000567705	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.39	■□□□□ 0.53	2e-9	■■■■■ 59.4
INO80E-210	ENST00000567705	RINT1	Q6NUQ1	792 aa		18.39	■□□□□ 0.53
INO80E-210	ENST00000567705	ZNF598	Q86UK7	904 aa	Known RBP	18.39	■□□□□ 0.53
INO80E-210	ENST00000567705	CABP7	Q86V35	215 aa		18.39	■□□□□ 0.53
INO80E-210	ENST00000567705	SYT2	Q8N9I0	419 aa	Predicted RBP	18.39	■□□□□ 0.53
INO80E-210	ENST00000567705	BSND	Q8WZ55	320 aa		18.39	■□□□□ 0.53
INO80E-210	ENST00000567705	POLR3F	Q9H1D9	316 aa	Predicted RBP	18.39	■□□□□ 0.53
INO80E-210	ENST00000567705	ELAC1	Q9H777	363 aa	Known RBP	18.39	■□□□□ 0.53
INO80E-210	ENST00000567705	AGPAT5	Q9NUQ2	364 aa		18.39	■□□□□ 0.53
INO80E-210	ENST00000567705	UNC80	Q8N2C7	3258 aa		18.39	■□□□□ 0.53
INO80E-210	ENST00000567705		A0A0U1RQF3	1178 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	ARHGEF35	A5YM69	484 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	PPP6R2	O75170	966 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	YEATS4	O95619	227 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	SRGAP2C	P0DJJ0	459 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	ATF7	P17544	494 aa	Predicted RBP	18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	SFPQ	P23246	707 aa	Known RBP eCLIP	18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	GUCY2C	P25092	1073 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	MBTD1	Q05BQ5	628 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	PPP2R2D	Q66LE6	453 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	ATL3	Q6DD88	541 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	EPSTI1	Q96J88	318 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	CLIC6	Q96NY7	704 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	GAS2L1	Q99501	681 aa	Predicted RBP	18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	RUSC1	Q9BVN2	902 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	PRDM12	Q9H4Q4	367 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	RNF19A	Q9NV58	838 aa		18.38	■□□□□ 0.53
INO80E-210	ENST00000567705	EPOP	A6NHQ4	379 aa		18.37	■□□□□ 0.53
INO80E-210	ENST00000567705	ERVK-21	P61565	698 aa		18.37	■□□□□ 0.53
INO80E-210	ENST00000567705	CEBPZ	Q03701	1054 aa	Known RBP	18.37	■□□□□ 0.53
INO80E-210	ENST00000567705	ARSH	Q5FYA8	562 aa		18.37	■□□□□ 0.53
INO80E-210	ENST00000567705	FAM117B	Q6P1L5	589 aa		18.37	■□□□□ 0.53
INO80E-210	ENST00000567705	KCNN1	Q92952	543 aa		18.37	■□□□□ 0.53
INO80E-210	ENST00000567705	CLP1	Q92989	425 aa	Known RBP	18.37	■□□□□ 0.53
INO80E-210	ENST00000567705	ZBED2	Q9BTP6	218 aa		18.37	■□□□□ 0.53
INO80E-210	ENST00000567705	TMEM161A	Q9NX61	479 aa		18.37	■□□□□ 0.53
INO80E-210	ENST00000567705	KCND2	Q9NZV8	630 aa		18.37	■□□□□ 0.53
INO80E-210	ENST00000567705	DENND3	A2RUS2	1198 aa		18.36	■□□□□ 0.53
INO80E-210	ENST00000567705	ZNF623	O75123	536 aa		18.36	■□□□□ 0.53
INO80E-210	ENST00000567705	UPP2	O95045	317 aa		18.36	■□□□□ 0.53
INO80E-210	ENST00000567705	POU3F3	P20264	500 aa	Predicted RBP	18.36	■□□□□ 0.53
INO80E-210	ENST00000567705	UBA7	P41226	1012 aa		18.36	■□□□□ 0.53
INO80E-210	ENST00000567705	PHKA2	P46019	1235 aa		18.36	■□□□□ 0.53
INO80E-210	ENST00000567705	TFDP1	Q14186	410 aa		18.36	■□□□□ 0.53
INO80E-210	ENST00000567705	KARS	Q15046	597 aa	Known RBP	18.36	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms