RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 ITGB3BPQ13352 177 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-214ENST00000567572 MTMR1Q13613 665 aa19.32■□□□□ 0.68
CMTM3-214ENST00000567572 BAATQ14032 418 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-214ENST00000567572 TAF4BQ92750 862 aa19.32■□□□□ 0.68
CMTM3-214ENST00000567572 PBKQ96KB5 322 aa19.32■□□□□ 0.68
CMTM3-214ENST00000567572 SH3GL2Q99962 352 aa19.32■□□□□ 0.68
CMTM3-214ENST00000567572 GDF3Q9NR23 364 aa19.32■□□□□ 0.68
CMTM3-214ENST00000567572 HOXC10Q9NYD6 342 aa19.32■□□□□ 0.68
CMTM3-214ENST00000567572 WRAP73Q9P2S5 460 aaPredicted RBP19.32■□□□□ 0.68
CMTM3-214ENST00000567572 CSADQ9Y600 493 aa19.32■□□□□ 0.68
CMTM3-214ENST00000567572 A6NNZ2 444 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 ZMYND10O75800 440 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 CXCR5P32302 372 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 PSMC2P35998 433 aaKnown RBP19.31■□□□□ 0.68
CMTM3-214ENST00000567572 GGCXP38435 758 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 TNNC1P63316 161 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 PAK2Q13177 524 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 TUBB8Q3ZCM7 444 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 XRRA1Q6P2D8 792 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 C1orf186Q6ZWK4 172 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 SND1Q7KZF4 910 aaKnown RBP eCLIP19.31■□□□□ 0.68
CMTM3-214ENST00000567572 PIGOQ8TEQ8 1089 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 LMBR1Q8WVP7 490 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 BORCS6Q96GS4 357 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 MAF1Q9H063 256 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 PARVGQ9HBI0 331 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 LOXHD1Q8IVV2 1947 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 AGPSO00116 658 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 SLC9A1P19634 815 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 NPEPPSP55786 919 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 PPFIA1Q13136 1202 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 MYBPC2Q14324 1141 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 USP50Q70EL3 339 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-214ENST00000567572 MREGQ8N565 214 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 CALR3Q96L12 384 aaKnown RBP19.31■□□□□ 0.68
CMTM3-214ENST00000567572 NACC1Q96RE7 527 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 LXNQ9BS40 222 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 TSPYL1Q9H0U9 437 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 NAGPAQ9UK23 515 aa19.31■□□□□ 0.68
CMTM3-214ENST00000567572 IREB2P48200 963 aaKnown RBP19.3■□□□□ 0.68
CMTM3-214ENST00000567572 PPP2R5AQ15172 486 aa19.3■□□□□ 0.68
CMTM3-214ENST00000567572 DCAF17Q5H9S7 520 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-214ENST00000567572 ARHGEF16Q5VV41 709 aa19.3■□□□□ 0.68
CMTM3-214ENST00000567572 DPY19L2Q6NUT2 758 aa19.3■□□□□ 0.68
CMTM3-214ENST00000567572 ZNF571Q7Z3V5 609 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-214ENST00000567572 FAM76AQ8TAV0 307 aa19.3■□□□□ 0.68
CMTM3-214ENST00000567572 HDAC7Q8WUI4 952 aa19.3■□□□□ 0.68
CMTM3-214ENST00000567572 CNKSR2Q8WXI2 1034 aa19.3■□□□□ 0.68
CMTM3-214ENST00000567572 SIX2Q9NPC8 291 aa19.3■□□□□ 0.68
CMTM3-214ENST00000567572 PKD2L1Q9P0L9 805 aa19.3■□□□□ 0.68
CMTM3-214ENST00000567572 GCNT4Q9P109 453 aa19.3■□□□□ 0.68
CMTM3-214ENST00000567572 ZMYM2Q9UBW7 1377 aa19.3■□□□□ 0.68
CMTM3-214ENST00000567572 DDX39AO00148 427 aaKnown RBP19.29■□□□□ 0.68
CMTM3-214ENST00000567572 TGFB1I1O43294 461 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 SHOX2O60902 331 aaPredicted RBP19.29■□□□□ 0.68
CMTM3-214ENST00000567572 PHACTR2O75167 634 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 RFX1P22670 979 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 RPS6KA1Q15418 735 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 ALKBH5Q6P6C2 394 aaKnown RBP19.29■□□□□ 0.68
CMTM3-214ENST00000567572 MIER3Q7Z3K6 550 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 GSPT2Q8IYD1 628 aaKnown RBP19.29■□□□□ 0.68
CMTM3-214ENST00000567572 SYCE1Q8N0S2 351 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 ZC3H15Q8WU90 426 aaKnown RBP19.29■□□□□ 0.68
CMTM3-214ENST00000567572 ACAD9Q9H845 621 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 TBC1D22BQ9NU19 505 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 TMEM59LQ9UK28 342 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 RSPH10B2B2RC85 870 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 TULP2O00295 520 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 ZBTB39O15060 712 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 CCDC172P0C7W6 258 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 RSPH10BP0C881 870 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 MYCLP12524 364 aaPredicted RBP19.29■□□□□ 0.68
CMTM3-214ENST00000567572 ARID5AQ03989 594 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 TREML2Q5T2D2 321 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 HS2ST1Q7LGA3 356 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 FAM186BQ8IYM0 893 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 USP38Q8NB14 1042 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 BANK1Q8NDB2 785 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 ACTRT1Q8TDG2 376 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 TMEM174Q8WUU8 243 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 PSMB7Q99436 277 aa19.29■□□□□ 0.68
CMTM3-214ENST00000567572 GOLGA6CA6NDK9 693 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 HSF2BPO75031 334 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 FTCDO95954 541 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 GOLGA6DP0CG33 693 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 ACTN1P12814 892 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 GUCY2CP25092 1073 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 STAT1P42224 750 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 MATR3P43243 847 aaKnown RBP eCLIP19.28■□□□□ 0.68
CMTM3-214ENST00000567572 TCERG1LQ5VWI1 586 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 VSIG10LQ86VR7 867 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 SLC9A9Q8IVB4 645 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 LRRC57Q8N9N7 239 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 WHAMMQ8TF30 809 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 CDCA5Q96FF9 252 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 RUFY1Q96T51 708 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 A1CFQ9NQ94 594 aaKnown RBP19.28■□□□□ 0.68
CMTM3-214ENST00000567572 GOLGA6AQ9NYA3 693 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 CYP39A1Q9NYL5 469 aa19.28■□□□□ 0.68
CMTM3-214ENST00000567572 MYH10P35580 1976 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms